| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1466 |
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| Symbol | |
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| ID | 5170218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1455444 |
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| End bp | 1457162 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563995 |
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| Product | ABC transporter related |
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| Protein accession | YP_001245053 |
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| Protein GI | 148270593 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTCT TCTTATTTAC AGGTCATCTC AGAGACGATA TCAGAAAATT CGAGAGGAAG
TACAAAAAAC ACTATCCGAT TTTCTTCTTA CTGGAAGGCC TGTTTTTGAC CACCAACGTT
CTTACTCCAC TTCTCATCAA AAAGACCATC GACAGTGCGT TTTACAGAGG TGATGTGGGA
GAAATCGCTC TGTTCTCAGT ACTATACTTC ATCGTTCTTG TGGCCCAGTC TTTCATCATG
TACAAACTCA ACTACTCAGC TGCGAAGTAC TTGCTGAACG CATCCCGGGC TAGGGAATCG
AAGAGCGCAT ACGCAAAAAT CCTGGCGCTT CCACTGACTT ACGCGAACTC ACAGAACACC
GGTGATTATC TTTCGGTTTT CATGAGGGAT GTTCCGAAGG TAGCTTCGGG AGTTTACCTT
GGAAGGTTGC AGTTTTTCTT CAACCTGGGA TTTTTCCTTG CTGTTCTTTT CCTTTTGTTC
ATTCTGAGTG TAAAACTCAC TCTTGTGGTC CTGGTGAGCA TCGTTCTGTT TTTTGTGTCA
ACCTCGATTC TGAGGAAGAT GGTCATCAGG GCTTCTCAGA GAGATCAGGA ATCCTACCAG
AGGTTTTTGA AAAGATCCAG GGAAGTGGTG GAAGGAATTC CTGTTCTCAA ACAGTTTTCT
GGATCTTCGT TTCTCAAAAA CTTCCTCGAT TCAAGTGCCG GAGAATGGAG CAGGGCGAGT
ATCGCTCACA GTACGGCAAA TGAACTGTCG AACAGAAACA TCGACATTAA CAGATGGATC
GGGAGTACCA TCGTTCTTGC CTTCGGTATT TATCTTCTCT GGAAGGGTGA GATAAGTGTC
GGAACACTTC TGGCCTTCGA ATCTTACATG AACTGGATGT ACGACATCGT CAGAATGGCG
CTCACAGGCC TGACAATGTT CTTTTCGACG CTTCCAAACT GGGAAAACTT TGCGAGAATA
TTTTCCATGC CCTTTGAAAG AGCAAGCGGT ATAAATCTTG AAAAGTTCGA AAAACTGCAA
TTGAGGAATG TGTATTTTAA ATACGACGGA ACTCCTGTTC TCACTGGTTT GAATTTCGAG
ATAAACTCCG GGGATAAGAT CGCAATTGTG GCAAGATCTG GGGCAGGAAA GAGCACGCTC
GTTTCTCTTT TCAACAGGCT ACTGTCTCCC ACAGAGGGTG AAATTCTCAT AAACGGTGTT
CCCATCGAAC AGTACTCTCT TCAATCACTC AGAAGAAACA TCGTTCTTGT TCGCTCGAAC
GATATACTCT TTGATACAAC AATCAGAAAC AACATCACCC TTTTTGAAGA CTTTCCAGAA
GATGAAATCG AAAATGTTCT CAAAATGTGT GAGTGTGACT TTGTTGAGAA ACTGGAAAGC
GGAATAGACA CGATCGTAGG AGAGAGGGGA ACAAAACTCT CAGATGGTCA AAGGCAGAGA
ATAGTCCTCG CGAGAGCTTT GATAAGAAAA CCACAGGTTC TCATCCTAGA CGAGGCCACC
TCTGGTGTTG ATGGCAAGAC GGAGGAGAGG ATTTTCGAGA AAATCTTGAG GGAAATAGAA
ACTGTGATTA TCATCTCACA CAGGCTTTCC ACTGTGAGAA AGGCCAAAAA GATATACGTC
ATGGAGAACG GACGGATTCT GGACTCTGGT TCTCACGAGG AGCTGATCGT CAGGTGTGAA
AAATACACAG AGATTCTAAA GGAGCAGTTT GTAGAATGA
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| Protein sequence | MNLFLFTGHL RDDIRKFERK YKKHYPIFFL LEGLFLTTNV LTPLLIKKTI DSAFYRGDVG
EIALFSVLYF IVLVAQSFIM YKLNYSAAKY LLNASRARES KSAYAKILAL PLTYANSQNT
GDYLSVFMRD VPKVASGVYL GRLQFFFNLG FFLAVLFLLF ILSVKLTLVV LVSIVLFFVS
TSILRKMVIR ASQRDQESYQ RFLKRSREVV EGIPVLKQFS GSSFLKNFLD SSAGEWSRAS
IAHSTANELS NRNIDINRWI GSTIVLAFGI YLLWKGEISV GTLLAFESYM NWMYDIVRMA
LTGLTMFFST LPNWENFARI FSMPFERASG INLEKFEKLQ LRNVYFKYDG TPVLTGLNFE
INSGDKIAIV ARSGAGKSTL VSLFNRLLSP TEGEILINGV PIEQYSLQSL RRNIVLVRSN
DILFDTTIRN NITLFEDFPE DEIENVLKMC ECDFVEKLES GIDTIVGERG TKLSDGQRQR
IVLARALIRK PQVLILDEAT SGVDGKTEER IFEKILREIE TVIIISHRLS TVRKAKKIYV
MENGRILDSG SHEELIVRCE KYTEILKEQF VE
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