Gene Tpet_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1465 
Symbol 
ID5171500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1453730 
End bp1455424 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content44% 
IMG OID640563994 
ProductABC transporter related 
Protein accessionYP_001245052 
Protein GI148270592 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG GAAAGTTTCG GCTCTTGAGG AAGAATCACA TAGCACTTGC CGTTTTGACA 
ACTGCGAGCT TAGTTGCCTC GGGTTTTTTC TATTCCAGAA GGGTCACTTT GCTTCAAAGT
GCCGTTGACA GAGCGATTCA CAGCAAAGAA CTTTCATCTT TCCTTGGAGA CATTCTGTTG
TTTCTTGTGT TCCTCTTGTT AACCATTATT TTCGATTTCC TGGCCAGTTT CATGTCCGCT
GTCAACAACG TCGGTATGTT CAAAAATTTG GTCAGAAGTC AGATAAGACT GATGCTCGAC
GCTGATATGC TTGAACTGAA AAAGCAAAAC ACAGGAGAGA TAATAACCCG CATGTTCGAT
GATGGGTGGT ATATAATCAG TCTGTACTCC TCTACAATTC CAGACCTTGT GGCAACATCG
TTCAAAGTAG GACTGCTCGT TTTCGTGTTC TACCAGCTCA GTCCCAGGAT TCTTCTCATT
GCCCTGCTTC TGTCTCCTCT CTACAGTTTT CCACTATCGA GTCCCAGACG GAGAATAATG
GAACATCAGG AAAAAGAACG CTCGAGTTTT GAGAAATGTG TCAAGTTTAT AAACGAGACG
TTGAGTGGGG CGGCGGTTAT CAAGGCATTC GAATCGAAGA GATTTTTCTA CAAAGAATTC
GGAAAATTAA CTAACCTGTG GTTGAACACG TCGAATACGC TCTTCAATGT GGTGGCGAAA
ACGGAGAGTC TCTATCCGTT TTTAAACGGA TTGCTCCCGA TACTCGTTGT TGCTCTATCG
TCTTTTCTCA TCGCGAAAAA GGAAATAACA ATCGGAAGTG CGATATCGTT TTTCTACTTC
ATCAGCGGTT TTTATTCATC AATAAGCAAC GTTTACAGTT CTGTTCTAGA CATTATGAGA
TCAAGGACGT ATAAAGAACG AATTTCAGAG GTTATGGAAC TCAGCGCTGA GAAAGGTGGT
GGAAAAGAGC TCGGAGACTT CAAACAGATG AGTTTGCAAA ATGTTTCCTT TGGATATCCA
GATGGCGGGG AGATACTCAC TGATTTAAAC ATAAAGATAG ACGCAGGCGA CAGGGTGGCC
ATAGTGGCGA GTTCTGGGGA GGGAAAGAGC ACACTTGTGT CACTCTTCAA CCGCTTTCTC
ACACCCACAA AAGGTCAGAT CCTCATCAAC GACATCCCTA TCGAGCAGTA TTCACTTTCT
TCACTCAGAA AGAAAATCAT CCTTGTTCGA TCGAACGACA TCTTGTTCGA TACTACCATC
AAAAACAACA TCACGCTTTT TGAGGACTTC CCGGAGGATG AGCTGGAACG TATTCTCAGG
ATGTGTGAGT GCGATTTCGT CGAGAAACTG GAAAACGGGA TACACACCGT TGTTGGTGAA
AGAGGAACAA AACTCTCGGA CGGTCAAAGG CAGAGGATCG TCCTTGCAAG GGCTTTGATC
AGGAAACCAC AGGTTCTCAT CCTGGACGAA GCCACCTCTG GTGTGGACAG CGAGACAGAG
GAGAAAATCT TTGAAAAAAT TCTGAAGGAA ATCAACACCG TGATCATAAT CTCCCATAGG
CTTTCCACAA TAAGAAAAGC AAAGAAGATC ATCGTACTGA ATAATGGAAG AGTGGAAGCC
GAAGGAACAC ACGAAGAACT CATGGAAAAA TCTCCCCTTT ACAGGGAGAT TGTAAGGAGT
CAATTGGAGG TATAA
 
Protein sequence
MKTGKFRLLR KNHIALAVLT TASLVASGFF YSRRVTLLQS AVDRAIHSKE LSSFLGDILL 
FLVFLLLTII FDFLASFMSA VNNVGMFKNL VRSQIRLMLD ADMLELKKQN TGEIITRMFD
DGWYIISLYS STIPDLVATS FKVGLLVFVF YQLSPRILLI ALLLSPLYSF PLSSPRRRIM
EHQEKERSSF EKCVKFINET LSGAAVIKAF ESKRFFYKEF GKLTNLWLNT SNTLFNVVAK
TESLYPFLNG LLPILVVALS SFLIAKKEIT IGSAISFFYF ISGFYSSISN VYSSVLDIMR
SRTYKERISE VMELSAEKGG GKELGDFKQM SLQNVSFGYP DGGEILTDLN IKIDAGDRVA
IVASSGEGKS TLVSLFNRFL TPTKGQILIN DIPIEQYSLS SLRKKIILVR SNDILFDTTI
KNNITLFEDF PEDELERILR MCECDFVEKL ENGIHTVVGE RGTKLSDGQR QRIVLARALI
RKPQVLILDE ATSGVDSETE EKIFEKILKE INTVIIISHR LSTIRKAKKI IVLNNGRVEA
EGTHEELMEK SPLYREIVRS QLEV