| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1457 |
|---|
| Symbol | |
|---|
| ID | 5171652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1447496 |
|---|
| End bp | 1448824 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640563988 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001245046 |
|---|
| Protein GI | 148270586 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCAAAC CTTCAAGATA CAATGTGATT TTCAGAGATG GCGACTACGT TGTGTTTGTG
AACTTTCTAA CCAGAGCGAT CGCTCGTCTG GAAAAAAGCA AAGCAGAAAT TGCAGAGAAG
ATTCTCAAAG ATCCAGACGA AGAGATCCCT GAAGAATGGC TTTCCATAAA GAAAGATTTG
ATCTACGGTG GGTATATCGT TGATGAGGAC TTCGACGAAA TAGAGCATCT GAAACTTATG
AACAGAATGA CCCGCTATGA TTCTTCCTCG GTTATGGTCA CGATCATACC CACCCTGGCA
TGCAATTTTG ATTGTATCTA CTGCTATGAA TCGAAAACAG GACCTTCGAT GACAGCGAAA
ACGGCAGAAA GGATCGTAGA ATATCTGAAA AGGCTGATTC GAACCAGAAG ATCTATAAGT
GTAGGCTGGT TCGGCGGGGA ACCCCTCCTG TGTTTTGACG TGGTGAAGTT CGTAAACTCA
TCGCTGATAG AAGCATGCAG AGAAAACAAT GTGGATTTTC ACTCCTCCAT GTCAACGAAT
GGATACCTTC TCGACAAAGA AAAAGCGGAA TGGTTTGACA GGCTCGAAAT AAGAAACGTT
CAAATAACGA TCGATGGCCC AGAAGATGTT CACAATAAAT ACAGGCCTTT GAAAGGTGGC
AAGGGAACTT TCGACACCAT TGTGGAAAAT CTGGAGAATC TCTTCAGGGT CACGGAGAAA
CTTCAGGTCA CGTTCAGAAT GAATGTGGGA CCTGACAACT TCCATCGTGT AGAAGAGTTT
CTGAACGTTC TGGAGCGATT TCCGAAAGAC AGAACGAGGG TATATTTCAG GTGGATTTTT
GGATCGAACA GCAGGGAATT CTTTTTCAGG AAGGTCTATG AGATCAGAGA TCGGGAGTCT
CTGAACATTC TCAATTTCTA CGAAAGTGCT GCGAAAAGAG GCTTCAATGT GTTTCTTCCC
GTTCTTGTGC AAAACAGATA CTGTGAGTAC GACTGTGTGT CTTCTGTTGT GATAGGTCCA
CAGGGAGAGT TGTATCCATG CACAGTGAGA GTGGGAAAAG GCATGGAGAT AGGAAGATTG
ACCAACCGAG GACTGGAATA CGACAGGAAA AAATATCTCA GATGGCATTC TTTCGATGCT
TTCGAAAGCG AAGAATGCAT GAGGTGCAAA CTCCTTCCTG TGTGCATGGG AGGATGTAGA
AGTGCCAGGT TCGATGGCAA AACGGGATGC CCTGAAGAGA AAAAGGATCC GGAGAAATTC
GCAAGGGAAT GGTACAGGAT AAAACTCCTT GAAAGGCAGG TCGAAAGACA TGAAGCCTTC
GAGATTTAA
|
|---|
| Protein sequence | MFKPSRYNVI FRDGDYVVFV NFLTRAIARL EKSKAEIAEK ILKDPDEEIP EEWLSIKKDL
IYGGYIVDED FDEIEHLKLM NRMTRYDSSS VMVTIIPTLA CNFDCIYCYE SKTGPSMTAK
TAERIVEYLK RLIRTRRSIS VGWFGGEPLL CFDVVKFVNS SLIEACRENN VDFHSSMSTN
GYLLDKEKAE WFDRLEIRNV QITIDGPEDV HNKYRPLKGG KGTFDTIVEN LENLFRVTEK
LQVTFRMNVG PDNFHRVEEF LNVLERFPKD RTRVYFRWIF GSNSREFFFR KVYEIRDRES
LNILNFYESA AKRGFNVFLP VLVQNRYCEY DCVSSVVIGP QGELYPCTVR VGKGMEIGRL
TNRGLEYDRK KYLRWHSFDA FESEECMRCK LLPVCMGGCR SARFDGKTGC PEEKKDPEKF
AREWYRIKLL ERQVERHEAF EI
|
|---|
| |