Gene Tpet_1444 details

Gene Information

• Locus tag: Tpet_1444
• ID: 5170501
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 1433102
• End bp: 1433878
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640563975
• Product: hypothetical protein
• Protein accession: YP_001245033
• Protein GI: 148270573

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000800024
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGA TGTTTATCAC TGTGTTCTTT GGTATAATGC TTGTTACTGT TTCTTTAATT 
TGCATAGCTG AAACTGCGCC AGAAATTATT TGGCAGAAAA TTCTTGGTGG ATCCAGTGAT 
GATTATGCTT TTTCAATTCA ACAAACACCC GATGGTGGGT ATATAGTGGC TGGATATACC 
GAGTCAAACG ATGGAGATGT CAAAGGGAAT CATGAAAACG GTGACTTTTG GATAGTAAAG 
CTTGATAAAG ATGGAAACAT AGAATGGCAG AAAACTCTCG GTGGATCCAA TTGGGATTGG 
GCTTTTTCAG TTCAACAAAC ACCCGATGGT GGGTATATAG TAGCTGGATT TACCTGGTCT 
AATGATGGAG ATGTTAGTGG AAATCATGGC TCGCTTGACG CTTGGATAGT AAAGCTTGAC 
AAAGATGGAA ACATAGAATG GCAGAAAACC CTTGGCGGAT CCGGAAATGA CTGGGCCACT 
TCAGTTCAAC AAACAACCGA TGGAGGTTAC ATAGTGGCTG GAGGAACCTA TTCAACCGAT 
GGGGTTATCC GAGGAAATCA TGGATCACTC GATGCTTGGG TAGTAAAGCT TGACGGCAAT 
GGGAACATGC AGTGGCAAAA AGCACTGGGC GGATCTGGTT CGGATAGTGC TTGGTCAGTT 
CAGCAGACAA CAGATGGAGG ATACATAGTG GCTGGATTTA CCAAATCAAA CGATGGAGAT 
GTGACTGGAA ATCATGGAAG CGCTGATTTT TGGGTTGTGA AGCTTGGTTG GCAGTGA 

 

Protein sequence

MSKMFITVFF GIMLVTVSLI CIAETAPEII WQKILGGSSD DYAFSIQQTP DGGYIVAGYT 
ESNDGDVKGN HENGDFWIVK LDKDGNIEWQ KTLGGSNWDW AFSVQQTPDG GYIVAGFTWS 
NDGDVSGNHG SLDAWIVKLD KDGNIEWQKT LGGSGNDWAT SVQQTTDGGY IVAGGTYSTD 
GVIRGNHGSL DAWVVKLDGN GNMQWQKALG GSGSDSAWSV QQTTDGGYIV AGFTKSNDGD 
VTGNHGSADF WVVKLGWQ