| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1433 |
|---|
| Symbol | |
|---|
| ID | 5170705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1421711 |
|---|
| End bp | 1422484 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640563962 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001245022 |
|---|
| Protein GI | 148270562 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCC AGAAACACGG AGAAGACTGG AAAGGTACAG TTGTGATCGT ACACGGTCTC
GGTGAACACT CCGGGAGGTA CAGAAGACTT GTGAGAGAAT TCGTTTCAGA GGGTGTTCAG
GTGGTCACAT TCGATCTACC AGGTCACGGC AAATCTCCCG GAAGAAGAGG GCACCTTCGT
TTTGATGACG TTTTTAAAAT ATTGAACGAG ATCACGAAAG ATCTGGAAAG GTTCGTGCTC
TTTGGTCACA GTCTCGGTGG ATTGATAGCT ATCAGATTCA CTCAGATTTT TCAGCCAGAG
AACCAGAAAG GGTTGGTGGT GTCGGCCCCC GCTATCCTGC TTCCAGATAC CCATTCTCCG
GTCCTTGAAT TCATGGTGAG GTTTCTGTCC TTTTTTGTTC CATTCCTCAC GATGAGCAAC
GGGATAAACC CGAGCGATCT TTCCAGGAAC AGAGAAGCGG TGGAAGCGTA CATAAGAGAT
CCCCTCGTTC ACGACAGAAT CTCCTTCAAG CTCGCTTCAG ATATGCTTTC CCATATGAAA
AAGGTTCTCA AAGACGCTGA AAGGATAAAG GTTCCTGTTC TCATTCTTCA CGGAACTGAT
GACAGGGTGG TGTCTTTTGA GGGAAGCAAG AAGTTTTTCG AAGCACTGAG CACAGAGAAA
AAACTGGTGA GCTTTCCTGG AGGATACCAT GAACTTTTTG AAGATCCAGA GCACCAGAAA
GAGTTTTTCA AAACGATAGT CGAGTGGAGT CTCGAAAAAC TCGGAGGGAA ATAA
|
|---|
| Protein sequence | MNIQKHGEDW KGTVVIVHGL GEHSGRYRRL VREFVSEGVQ VVTFDLPGHG KSPGRRGHLR
FDDVFKILNE ITKDLERFVL FGHSLGGLIA IRFTQIFQPE NQKGLVVSAP AILLPDTHSP
VLEFMVRFLS FFVPFLTMSN GINPSDLSRN REAVEAYIRD PLVHDRISFK LASDMLSHMK
KVLKDAERIK VPVLILHGTD DRVVSFEGSK KFFEALSTEK KLVSFPGGYH ELFEDPEHQK
EFFKTIVEWS LEKLGGK
|
|---|
| |