Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1424 |
Symbol | |
ID | 5170157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1413419 |
End bp | 1415581 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640563953 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001245013 |
Protein GI | 148270553 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.916012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAGTG ATGAGGAGTC TTTTGAAATC GTCAGACTTT ACAAAAGACT CACCGTTTAT GAGCTGCTGC TCTCTCTTGT GGATTCAATG TGTGCCCACT CGAAAGAAGA AGCTCTCAGG TTTTCCCTCA AAAAAGCCAG AGAATTTCTG GATGCGGAAG AAGTCTATCT GATAGAAGGT GATGTTTCTC ATTCCCCGAA GGGGGAGAAA CTCTCCATCG ACGAGATAAA AAAGAAACAT CCAGAAGCGA AGGTGAGAGA GTGGAAGAAC AAACTGCATC TTGTTGTGGT TCGCGATGAG GCACTCGATG AAGAAGAAGA GATACTCTGT ACGAAACTTT TAGAATTCGT CGGAAACGTA TCAGAAAAGC TCTGGAGACT TAAAGAAGAA GTCCAGAAAT TGAAAAAGTC GTACGAAGAA CAGCTGAAAG TTTCAGAGAT ACAGAAAGAA CACATAAAGA AAATGAGAAT AATTTACCAC GTCAGCCAGG CCATGAGATC TGTTTACGAC CCGAACAACC TTTACCGGGT GATTCTACTC AGTCTTGTCT CAGAAAGAGG ATTCAGTTTC GACCGTGCCG TTCTTCTCAA GAAAGATGAA AACACGAATT CCCTGGTAGT TGTTTCTGCG ATGGGTGGTG ATACTCCTCA GGAACATGAA GAACTCAAGA GATACCTCAG AAAAAGAACC TTGAGATACA CAGATCTGGT ACAGTTTCTA AGGGAAGAGG CACTCACATT TTCATTTGAG ACGAAATTCA ACGAAAAAAT AAGAGGGAAG AGATTTTACT ACAGAGAACA CCCGATATTT GAGAGGGTGG TTTTGAGAAA GAGTATAGTG AGGACTTCGA GAGAAACCAT CGAAAAAATC AGTCACGGAG TGGAAGACGT CATAAGTATC CTTGAAAACG ACGAGTTCAT GGTCTTTCCA CTCGTTGGGC GATGGGACAC TCTCGGTGTT GTGGTGGTGG ATAACAAATT CAGCAAAAAA GAAGTCACCG ATCTGGATCT GGACGTGCTC AAACTCTTTT CTGAAAGTGC AGGTCTTGCT CTGGAGAATG CATACAATTA TGAAAGTTTG AGAGAGAAAA CACTGGATCT TCAACGTCAA AACGAACTCG TGGAACACCT CAGGAACTTC AGCGAAAGCA TTCTGGAAAG CCTGGAAACA GCCATCATAA CACTGAGTAA AGATGGGCGC GTAACTGAAT GGAACAGAAA GGCAGAACAA CTGTTTGGCC TTAAGAAAGA AACCGCATTC GGGAGAAGGC TCAAAGATCT CCCCGGCTTT GAAGAGATCG GATCTGTCGC AGAAAGCGTT TTTGAAAACA GAGAACCTGT GTTTCTCAAC TTCTACAAAT TCGGAGAAAA GTATTTCAAC ATAAGATTTT CTCCCTTTAG AAACGCCAAA ACACAGCTGC TCGAAGGAGT TATCATCACG ATCGACGATG TCACAGAACT TTACAAATAC GAAGAGGAAA GAAAAAGAAG AGAAAGGCTC TCCATACTGG GAGAGATGAC CGCAAGGGTC GCCCACGAGA TAAGGAACCC GATAACGATA ATAGGCGGCT TCATAATGCG TATGAAAAAA CACCTTGACG ATCCAGAGAC GCTGAAAAAA TACGTCAACA TAATAACGAA CGAGTTATCC AGACTTGAGA CGATCGTCAA GGAAATCTTA GAATACAGCA AAGAACGGCA GGTGCTTGAA TTCACCGAGT TCAACTTGAA TGAACTCATA AGAGAAGTTT ACGTTCTATT CGAGGAAAAG ATCAGAAAGA TGAACATAGA CTTTTGCTTT GAAACGGACA ACGAAGACCT CAGGATTGAT GCCGATAGGA CGAGGATAAA ACAGGTACTG ATAAACCTTG TTCAAAATGC AATAGAAGCG ACAGGGGAAA ATGGTAAGAT AAAGATAACG TCGGAAGATA TGTACACCAG AGTGAGAGTG AGTGTCTGGA ATTCGGGTCC CCCCATACCG GAGGAGCTGA AAGAAAAGAT ATTCTCACCG TTCTTCACCA CAAAGACTCA GGGAACAGGT TTAGGACTTT CAATCTGCAG AAAGATCATA GAGGATGAAC ACGGAGGAAA AATATGGACG GAAAACAGAG AAAACGGGGT TGTTTTCATC TTTGAAATTC CAAAGACACC AGAAAAGAGG TGA
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Protein sequence | MTSDEESFEI VRLYKRLTVY ELLLSLVDSM CAHSKEEALR FSLKKAREFL DAEEVYLIEG DVSHSPKGEK LSIDEIKKKH PEAKVREWKN KLHLVVVRDE ALDEEEEILC TKLLEFVGNV SEKLWRLKEE VQKLKKSYEE QLKVSEIQKE HIKKMRIIYH VSQAMRSVYD PNNLYRVILL SLVSERGFSF DRAVLLKKDE NTNSLVVVSA MGGDTPQEHE ELKRYLRKRT LRYTDLVQFL REEALTFSFE TKFNEKIRGK RFYYREHPIF ERVVLRKSIV RTSRETIEKI SHGVEDVISI LENDEFMVFP LVGRWDTLGV VVVDNKFSKK EVTDLDLDVL KLFSESAGLA LENAYNYESL REKTLDLQRQ NELVEHLRNF SESILESLET AIITLSKDGR VTEWNRKAEQ LFGLKKETAF GRRLKDLPGF EEIGSVAESV FENREPVFLN FYKFGEKYFN IRFSPFRNAK TQLLEGVIIT IDDVTELYKY EEERKRRERL SILGEMTARV AHEIRNPITI IGGFIMRMKK HLDDPETLKK YVNIITNELS RLETIVKEIL EYSKERQVLE FTEFNLNELI REVYVLFEEK IRKMNIDFCF ETDNEDLRID ADRTRIKQVL INLVQNAIEA TGENGKIKIT SEDMYTRVRV SVWNSGPPIP EELKEKIFSP FFTTKTQGTG LGLSICRKII EDEHGGKIWT ENRENGVVFI FEIPKTPEKR
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