| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1424 |
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| Symbol | |
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| ID | 5170157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1413419 |
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| End bp | 1415581 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563953 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001245013 |
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| Protein GI | 148270553 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.916012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAAGTG ATGAGGAGTC TTTTGAAATC GTCAGACTTT ACAAAAGACT CACCGTTTAT
GAGCTGCTGC TCTCTCTTGT GGATTCAATG TGTGCCCACT CGAAAGAAGA AGCTCTCAGG
TTTTCCCTCA AAAAAGCCAG AGAATTTCTG GATGCGGAAG AAGTCTATCT GATAGAAGGT
GATGTTTCTC ATTCCCCGAA GGGGGAGAAA CTCTCCATCG ACGAGATAAA AAAGAAACAT
CCAGAAGCGA AGGTGAGAGA GTGGAAGAAC AAACTGCATC TTGTTGTGGT TCGCGATGAG
GCACTCGATG AAGAAGAAGA GATACTCTGT ACGAAACTTT TAGAATTCGT CGGAAACGTA
TCAGAAAAGC TCTGGAGACT TAAAGAAGAA GTCCAGAAAT TGAAAAAGTC GTACGAAGAA
CAGCTGAAAG TTTCAGAGAT ACAGAAAGAA CACATAAAGA AAATGAGAAT AATTTACCAC
GTCAGCCAGG CCATGAGATC TGTTTACGAC CCGAACAACC TTTACCGGGT GATTCTACTC
AGTCTTGTCT CAGAAAGAGG ATTCAGTTTC GACCGTGCCG TTCTTCTCAA GAAAGATGAA
AACACGAATT CCCTGGTAGT TGTTTCTGCG ATGGGTGGTG ATACTCCTCA GGAACATGAA
GAACTCAAGA GATACCTCAG AAAAAGAACC TTGAGATACA CAGATCTGGT ACAGTTTCTA
AGGGAAGAGG CACTCACATT TTCATTTGAG ACGAAATTCA ACGAAAAAAT AAGAGGGAAG
AGATTTTACT ACAGAGAACA CCCGATATTT GAGAGGGTGG TTTTGAGAAA GAGTATAGTG
AGGACTTCGA GAGAAACCAT CGAAAAAATC AGTCACGGAG TGGAAGACGT CATAAGTATC
CTTGAAAACG ACGAGTTCAT GGTCTTTCCA CTCGTTGGGC GATGGGACAC TCTCGGTGTT
GTGGTGGTGG ATAACAAATT CAGCAAAAAA GAAGTCACCG ATCTGGATCT GGACGTGCTC
AAACTCTTTT CTGAAAGTGC AGGTCTTGCT CTGGAGAATG CATACAATTA TGAAAGTTTG
AGAGAGAAAA CACTGGATCT TCAACGTCAA AACGAACTCG TGGAACACCT CAGGAACTTC
AGCGAAAGCA TTCTGGAAAG CCTGGAAACA GCCATCATAA CACTGAGTAA AGATGGGCGC
GTAACTGAAT GGAACAGAAA GGCAGAACAA CTGTTTGGCC TTAAGAAAGA AACCGCATTC
GGGAGAAGGC TCAAAGATCT CCCCGGCTTT GAAGAGATCG GATCTGTCGC AGAAAGCGTT
TTTGAAAACA GAGAACCTGT GTTTCTCAAC TTCTACAAAT TCGGAGAAAA GTATTTCAAC
ATAAGATTTT CTCCCTTTAG AAACGCCAAA ACACAGCTGC TCGAAGGAGT TATCATCACG
ATCGACGATG TCACAGAACT TTACAAATAC GAAGAGGAAA GAAAAAGAAG AGAAAGGCTC
TCCATACTGG GAGAGATGAC CGCAAGGGTC GCCCACGAGA TAAGGAACCC GATAACGATA
ATAGGCGGCT TCATAATGCG TATGAAAAAA CACCTTGACG ATCCAGAGAC GCTGAAAAAA
TACGTCAACA TAATAACGAA CGAGTTATCC AGACTTGAGA CGATCGTCAA GGAAATCTTA
GAATACAGCA AAGAACGGCA GGTGCTTGAA TTCACCGAGT TCAACTTGAA TGAACTCATA
AGAGAAGTTT ACGTTCTATT CGAGGAAAAG ATCAGAAAGA TGAACATAGA CTTTTGCTTT
GAAACGGACA ACGAAGACCT CAGGATTGAT GCCGATAGGA CGAGGATAAA ACAGGTACTG
ATAAACCTTG TTCAAAATGC AATAGAAGCG ACAGGGGAAA ATGGTAAGAT AAAGATAACG
TCGGAAGATA TGTACACCAG AGTGAGAGTG AGTGTCTGGA ATTCGGGTCC CCCCATACCG
GAGGAGCTGA AAGAAAAGAT ATTCTCACCG TTCTTCACCA CAAAGACTCA GGGAACAGGT
TTAGGACTTT CAATCTGCAG AAAGATCATA GAGGATGAAC ACGGAGGAAA AATATGGACG
GAAAACAGAG AAAACGGGGT TGTTTTCATC TTTGAAATTC CAAAGACACC AGAAAAGAGG
TGA
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| Protein sequence | MTSDEESFEI VRLYKRLTVY ELLLSLVDSM CAHSKEEALR FSLKKAREFL DAEEVYLIEG
DVSHSPKGEK LSIDEIKKKH PEAKVREWKN KLHLVVVRDE ALDEEEEILC TKLLEFVGNV
SEKLWRLKEE VQKLKKSYEE QLKVSEIQKE HIKKMRIIYH VSQAMRSVYD PNNLYRVILL
SLVSERGFSF DRAVLLKKDE NTNSLVVVSA MGGDTPQEHE ELKRYLRKRT LRYTDLVQFL
REEALTFSFE TKFNEKIRGK RFYYREHPIF ERVVLRKSIV RTSRETIEKI SHGVEDVISI
LENDEFMVFP LVGRWDTLGV VVVDNKFSKK EVTDLDLDVL KLFSESAGLA LENAYNYESL
REKTLDLQRQ NELVEHLRNF SESILESLET AIITLSKDGR VTEWNRKAEQ LFGLKKETAF
GRRLKDLPGF EEIGSVAESV FENREPVFLN FYKFGEKYFN IRFSPFRNAK TQLLEGVIIT
IDDVTELYKY EEERKRRERL SILGEMTARV AHEIRNPITI IGGFIMRMKK HLDDPETLKK
YVNIITNELS RLETIVKEIL EYSKERQVLE FTEFNLNELI REVYVLFEEK IRKMNIDFCF
ETDNEDLRID ADRTRIKQVL INLVQNAIEA TGENGKIKIT SEDMYTRVRV SVWNSGPPIP
EELKEKIFSP FFTTKTQGTG LGLSICRKII EDEHGGKIWT ENRENGVVFI FEIPKTPEKR
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