Gene Tpet_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1418 
Symbol 
ID5171098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1407331 
End bp1407753 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content49% 
IMG OID640563947 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_001245007 
Protein GI148270547 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGCG AATTCGAGAT CATGAACATC AGCGCAACTG GAATGTCCGC TCAGAGACTC 
AGAGTCGAGA TCGTCTCAAC AAACATAGCG AACGCTGAAA CCACCAGAAC TGAAACAGGA
GAACCTTACA GGAGGAAGGT ACCTGTGTTC GCCGAGTATC TGAGAAGAAC ACCAAATGGT
AAAATAGAAA GCGCTGGGGT GAAAGTTGTA AAAATAGAGG AAGACCCTTC ACCGTTCAGA
CTCGTGTACG ATCCCGCACA CCCTGACGCG GATGAGAACG GATACGTGAG GATGCCCAAC
GTGAATATCG TTAGAGAAAT GGTGGATCTA ATAAACGCGC AGAGAGCATA CGATGCGAAC
GTGGCGGCTT TCAATGTGAC AAAGGCTATG GTGAACAGCG CCCTTCAGAT AGGAAGGGGG
TAA
 
Protein sequence
MMSEFEIMNI SATGMSAQRL RVEIVSTNIA NAETTRTETG EPYRRKVPVF AEYLRRTPNG 
KIESAGVKVV KIEEDPSPFR LVYDPAHPDA DENGYVRMPN VNIVREMVDL INAQRAYDAN
VAAFNVTKAM VNSALQIGRG