| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1410 |
|---|
| Symbol | |
|---|
| ID | 5171233 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1400579 |
|---|
| End bp | 1401565 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640563938 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001244999 |
|---|
| Protein GI | 148270539 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGAAAAC TTTCAATCGT CTTTCTGATA GTCGTTTCCG CCCTTGTTTT CTCCTGGAGC
GGTCACGAAG GTTTGACCTA CTACATCGTG AAAGATATTG TACCAGATGA GATGGTCACC
ATCACACCGT ACAACTACCA GGAAAACAGA GTTTACAATC TCTCAAAACT CGTTCTTGAA
GACGTGTGTG GTCAAGATAC GATATCTGCC TGGGAAGGAG CAATTTTACC TCCAAATCCC
CCTCCTGAAG ACGAAAAGGT TCCTGCCTGG CAGATCCTGA CCGTGTACTC TTCGGAGCCG
GATTGGGGAA TGGACCAGGG CCTCGATCTG TCACCGTATC AGTTCCTCAT AGGAAACAGT
CAGGGTGTGC GTCACATGAA GTATCGAATC CTTGGCCTCG AGTTCTTCGA AGCGGACAAG
AGTTTTTACT ACTTCCACGA TATGGCAAAA GAAGCCTTTA GAAAGGGAGA CAGATACTGG
GGCTACAGGT TCCTCGCCAG GGCTCTTCAC TACATCGAAG ATCTATCACA GCCCTATCAC
AACACTCCTG GTGAGGTGGG AGAAATCTTT CAGGCACTCT TCGACAGATC CATCATGAAG
ATGTTGATGA ACGCCCATTA CGTGTACGAT GATTATTTAG CGTATCTCAT CTATTCCGGA
GATGAAGAAA CGATAAAAAC GATCGAAGAA GCTACACCTG TATTTTTGAA GTCCGAGTGG
CACCTCGTTC AGGAAGTGAG AAAACTCGCT TTATCGCACT TTCCAAAAGT CCACAGAGAG
ATAAAGAAGG TCTTTGGAGA AAAACTGAAA GAAAGAACGG GTGATCTGGA AAGCTTCACC
GTTGTCTCTG TTGAAGAATT CAGAGAGGCG GATCGGAGAG GAGACCTCGT TCTTTTGAAA
CGTTACACCC TTGAACTCAT AGGGAAGGTA TCATCGTACT TGAAGGGATA CCTCATAGAT
TTTCTCAAGG CCGTGAAATC TTTTTGA
|
|---|
| Protein sequence | MRKLSIVFLI VVSALVFSWS GHEGLTYYIV KDIVPDEMVT ITPYNYQENR VYNLSKLVLE
DVCGQDTISA WEGAILPPNP PPEDEKVPAW QILTVYSSEP DWGMDQGLDL SPYQFLIGNS
QGVRHMKYRI LGLEFFEADK SFYYFHDMAK EAFRKGDRYW GYRFLARALH YIEDLSQPYH
NTPGEVGEIF QALFDRSIMK MLMNAHYVYD DYLAYLIYSG DEETIKTIEE ATPVFLKSEW
HLVQEVRKLA LSHFPKVHRE IKKVFGEKLK ERTGDLESFT VVSVEEFREA DRRGDLVLLK
RYTLELIGKV SSYLKGYLID FLKAVKSF
|
|---|
| |