| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1407 |
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| Symbol | |
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| ID | 5171156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1397628 |
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| End bp | 1398740 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563934 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001244996 |
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| Protein GI | 148270536 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.890613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTGA TCGGAGGAGA AGTTTCAATA AAGAACGTCA GCAAATTTTT CGATGACTTC
CAGGTTTTGA AGAACGTCTC CCTGGATATA AAGAAAGGAG AGTTTTTTTC CATACTCGGC
CCATCGGGTT GTGGGAAAAC AACGCTCCTT CGCGTGATAG CGGGCTTCGA GGGTGTGGAA
AGTGGAGATG TTCTCCTGGA TGGAAAGTCG ATACTGAATT TGCCTCCAAA CAAAAGGCCC
GTGAACATCA TATTTCAGAA CTACGCTCTG TTTCCTCATC TCACAGTTTT TGAAAACATC
GCGTTCCCCT TGAAACTCAA AAAACTATCC GAGAACGAAA TAAACCAGAG AGTGAACGAA
CTGCTTTCGC TCATAAGAAT GGAAGAACAT GCTCAGAAAA TGCCTTCCCA ACTGTCTGGT
GGTCAGAAGC AGAGAGTGGC GATAGCGAGG GCCCTCGCCA ACGAGCCGAG GGTCCTCCTT
CTCGATGAAC CGCTGAGCGC TCTCGACGCG AAACTGAGAC AGGAACTCCT TGTCGAGCTC
GACAATCTTC ACGATAGAGT CGGTATCACC TTCATTTACG TAACACACGA TCAGGCTGAA
GCGATCAGTG TTTCAGACAG AGTCGCTCTC ATGAACGAAG GAGAAATCGT TCAGGTTGGA
ACTCCCTACG AGGTGTATGA GAGCCCGGTC AACGTCTTTG CGGCGACTTT CATCGGAGAA
ACGAACCTCA TGAAAGCCGA GGTTGTTGAA GTGGAAGATG AATATTACGT CGTAGAAAGT
CCAGGAATCG GCCAGTTCAG GTGTTACAGA GACAAGGAGG CGAAAAAGGG TGATGTATTG
CTCATCACCC TGAGGCCCGA AAAGATCAGA ATTTCGAAGA GGGAATTTCA GTCCGGTAAA
ATTTTCAACG TGTTTCACGG AATCGTAGAA GAAGAAATAT ACATGGGACA CCAGACGAAG
TACTTCGTTC GACTCGACGA AGGCTACATA ATGAAAGTTT ACAAACAGCA CGCAAGGTAC
ATACTCGATG AGCCGATCAT AAAATGGGAA GATGAAGTGT TCATTACGTG GAATCCAGAT
GACAGCTTCA TTGTAGAGGT GCTTGAAGAA TGA
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| Protein sequence | MKLIGGEVSI KNVSKFFDDF QVLKNVSLDI KKGEFFSILG PSGCGKTTLL RVIAGFEGVE
SGDVLLDGKS ILNLPPNKRP VNIIFQNYAL FPHLTVFENI AFPLKLKKLS ENEINQRVNE
LLSLIRMEEH AQKMPSQLSG GQKQRVAIAR ALANEPRVLL LDEPLSALDA KLRQELLVEL
DNLHDRVGIT FIYVTHDQAE AISVSDRVAL MNEGEIVQVG TPYEVYESPV NVFAATFIGE
TNLMKAEVVE VEDEYYVVES PGIGQFRCYR DKEAKKGDVL LITLRPEKIR ISKREFQSGK
IFNVFHGIVE EEIYMGHQTK YFVRLDEGYI MKVYKQHARY ILDEPIIKWE DEVFITWNPD
DSFIVEVLEE
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