| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1406 |
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| Symbol | |
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| ID | 5170460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1396843 |
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| End bp | 1397631 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563933 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244995 |
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| Protein GI | 148270535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACG TGTACTTTCT GTGGTTGCTC TTTCTTTTCA TTCTTCCCAT CTCAATAGTT
TTTGTTTATA GCTTTCTGGA GCCACAGATC TACGGTGGGA TCAAGTGGAG CTTTTCCCTC
GAAGCGTATA GCTATCTTCC AAGGTATCTG GCACTCATCT GGAGATCCGT CTGGATCGCC
GGTGTTGCGA CGTTCATTAC CCTCGCTGTG GCGGTTCCTG TTGCCTTCTA CATAGCCAGA
AGCAAGCTTA AAAACTTTCT TTTACTTTTG ACGGTTATAC CCTTTTGGAC CAACTCTCTC
ATCAGAATTT ACGCTTGGAA GATAGTTCTT GGCAACAACG GACTCATAAA TCAGTTTCTC
GGCCTGTTCG GCATTGGTCC CGTTCAATTT CTCTACAACT CTTTCGCTGT CATACTGGTG
ATAGTCTATA CCTACCTTCC TTTCGCTATA CTTCCTCTTT ATGCCGCCAT GGAAAAGGTG
GAAGACAGTA TCCTTGAAGT GTCCTTGGAT CTTGGAGCCA GCAGGATGTA CACGTTCACC
AGGGTCCTTC TTCCCAACGT CAGAGCGGGC CTTCTCACAG CTTTCGTTTT CGTATTCATT
CCCGCCCTTG GATCCTACGC CATACCGGAT CTCGTCGGTG GCGTGAACTC CAAGATGATA
GGAAACGAGA TCGTAAGGCA ACTTCTGACC GTCAGAAACT GGCCCGTCGC GTCCGCGATG
TCCAACATTC TCACCCTGAT AGCTCTCCTG AGTATCATCT TTGTGATGAA AAGGGGAGAG
AGACGTTGA
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| Protein sequence | MKYVYFLWLL FLFILPISIV FVYSFLEPQI YGGIKWSFSL EAYSYLPRYL ALIWRSVWIA
GVATFITLAV AVPVAFYIAR SKLKNFLLLL TVIPFWTNSL IRIYAWKIVL GNNGLINQFL
GLFGIGPVQF LYNSFAVILV IVYTYLPFAI LPLYAAMEKV EDSILEVSLD LGASRMYTFT
RVLLPNVRAG LLTAFVFVFI PALGSYAIPD LVGGVNSKMI GNEIVRQLLT VRNWPVASAM
SNILTLIALL SIIFVMKRGE RR
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