Gene Tpet_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1401 
Symbol 
ID5171487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1393097 
End bp1393696 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content44% 
IMG OID640563928 
ProductNUDIX hydrolase 
Protein accessionYP_001244990 
Protein GI148270530 
COG category[R] General function prediction only 
COG ID[COG4112] Predicted phosphoesterase (MutT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.426653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGTG AAAGAATACT GGTCGTGAAA ACGGAAGACT TTTTAAAAGA GTTCGGTGAA 
TTCGAAGGAT TCATGAGAGT GAACTTCGAG AACTTCTTGA ACTTCCTGGA CCAGTACGGA 
TTTTTCCGGG AAAGAGAGGA AGCAGAATAC GATGAAACGA CGAAACAGGT GATACCTTAC 
GTAGTTATAA TGGATGGCGA CAGAGTCCTC ATCACAAAAA GAACAACAAA ACAGTCCGAG 
AAGAGGCTCC ACAATCTTTA CTCTCTCGGA ATAGGCGGTC ATGTGAGAGA AGAGGACGGA 
GCAACACAAC GGGAAGCGTT TTTGAAAGGG CTCGAACGCG AAGTAAACGA GGAAGTGGAT 
GTCTCGCTAA GAGAACTGGA ATTTCTCGGA CTCATAAATT CGTCAACAAC CGAAGTGAGC 
AGAGTACACC TTGGTGCTCT ATTTCTCGGC AAGGGAGAGT TTTTCTCTGT AAAAGAAAAA 
GATCTGTTCG AATGGGAACT CATAAAGCTC GAAGAACTGG AGAAGTTCTC AGGAGTGATG 
GAAGGTTGGT CGAAAATATC GGCAACGGTT CTGCTGAACT TGTTTCGTAC GCAAAACTGA
 
Protein sequence
MKSERILVVK TEDFLKEFGE FEGFMRVNFE NFLNFLDQYG FFREREEAEY DETTKQVIPY 
VVIMDGDRVL ITKRTTKQSE KRLHNLYSLG IGGHVREEDG ATQREAFLKG LEREVNEEVD 
VSLRELEFLG LINSSTTEVS RVHLGALFLG KGEFFSVKEK DLFEWELIKL EELEKFSGVM 
EGWSKISATV LLNLFRTQN