| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1400 |
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| Symbol | |
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| ID | 5171438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1392336 |
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| End bp | 1393151 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563927 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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| Protein accession | YP_001244989 |
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| Protein GI | 148270529 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.442618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCGAAA ATATCGGCAA CGGTTCTGCT GAACTTGTTT CGTACGCAAA ACTGAATCTC
TACCTGGATG TGCTTGGAAA AAGATCCGAT GAATACCACG AAATAGTGGG ATTGTTTCAA
ACGATTTCTC TTCACGACAC ACTCACTGTA GAAATCTGTG ATGGAGGTTT CTACCTGGAA
AGCAACGTAG CTCTGCCCTC GGACAACACG ATCAAAAGAG CCTGGGAGAT GTTCAGGAAA
AACACAGGAG AAGAATTCGG CCTCAAAGTC ACGTTGAAAA AGAAGGTCCC AGTAGGCTCT
GGCCTTGGAG GAGGGAGTTC CAACGCTGCA GCGATTCTCA GATATCTTGG TGAAGTTTTC
AAAATACCTC TTGAAGACCT TCTGAATATA GCAGCTCAGG TGGGAAGCGA TGTACCCTTT
TTTCTTTACG GAGGAACCGC TCTTGTGAGA GGAAGAGGAG AAATCGTGGA AAAACTCGAA
GATATTGAAG GGTACTCTGT CAATCTGTTC TTCCCGGGCA TTCACTCTTC AACGAAAGAA
ATGTATCTGT CTCTCACACC AGAGATGTAC AGAAAAGGAC CCGGCAGGGT AGAGGAACTA
CACAGGGCTT ATCTTGAAAG GGATTACGAA AAGATAAGGA AACTCTCCTA CAACGTGTTT
GAGAAGGTGT TCTTAGAGAA ACACCCGGAG GTAATGTATG GACTGAGAAA CTTTGGCGAT
GGTTCCATAG TGAAAATGAT GACGGGAAGC GGAAGTGCCT TTTTCGCTCT CTACCCTCTA
GACGAAGGAA ATTACCCGTT TGTGGGAGGT GTTTAA
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| Protein sequence | MVENIGNGSA ELVSYAKLNL YLDVLGKRSD EYHEIVGLFQ TISLHDTLTV EICDGGFYLE
SNVALPSDNT IKRAWEMFRK NTGEEFGLKV TLKKKVPVGS GLGGGSSNAA AILRYLGEVF
KIPLEDLLNI AAQVGSDVPF FLYGGTALVR GRGEIVEKLE DIEGYSVNLF FPGIHSSTKE
MYLSLTPEMY RKGPGRVEEL HRAYLERDYE KIRKLSYNVF EKVFLEKHPE VMYGLRNFGD
GSIVKMMTGS GSAFFALYPL DEGNYPFVGG V
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