Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1376 |
Symbol | |
ID | 5170318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1367832 |
End bp | 1368563 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640563901 |
Product | ABC transporter related |
Protein accession | YP_001244966 |
Protein GI | 148270506 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000264902 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGGAGC TCATCGATGT GTGGTACGAG GTAGAGGGAA AGGCTATCCT GAAGGGAATA AACGCTCGCT TCGAAAAACA AAGGGTTTAC TCCATACTGG GAACCAACGG TGCGGGAAAA AGCACTCTCG CCTATTTGAT CATGGGGCTT GAGGGCTACA GACCCACCAG GGGAAAGATA CTCCTCGACG GTGAGGACAT CACCGATCTT TCCGTAACAG AGAGAGCCAA AAGAGGGATC ACTTTGATGT GGCAGGAACC CGCTCGATTC ACAGGAATCA AGATCAGAGA CTATTTGACT CTCGGTGGAA GAAGGAAAGT ATCGAAAGAG GAGCTCGAAA GGGTCCTGGA ACTCGTTGGT CTGAACCCAG CACTCTACTT GGAAAGAAAC GTCGATGAAA AGCTGAGCGG TGGAGAGAGA AAGAGGGTAG AACTTGCGAG TATTCTTCTC ATGAAACCCA GATACACCAT CCTCGATGAG CCAGACTCCG GGATAGATAT TATGAGCCTT GAGATGATAG AGAAGGTTCT CTCGGAACTC GTGAATGCGG GTGGCTCTGT GATCTTAGTC ACTCACAGAG AAGAAATTGC CCTGGAGAGC GACTACGCCT TTCTCATTTG TCACGGCTCC ATCTTGAAAG AAGGAAACCC ATCTGAGATC GTGCAGTTCT ACAAAAACAG CTGTGACAGA TGTGATCATC CGAATGAACC ATCAGGGGAG ATGATCGTAT GA
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Protein sequence | MLELIDVWYE VEGKAILKGI NARFEKQRVY SILGTNGAGK STLAYLIMGL EGYRPTRGKI LLDGEDITDL SVTERAKRGI TLMWQEPARF TGIKIRDYLT LGGRRKVSKE ELERVLELVG LNPALYLERN VDEKLSGGER KRVELASILL MKPRYTILDE PDSGIDIMSL EMIEKVLSEL VNAGGSVILV THREEIALES DYAFLICHGS ILKEGNPSEI VQFYKNSCDR CDHPNEPSGE MIV
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