| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1371 |
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| Symbol | |
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| ID | 5171501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1363221 |
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| End bp | 1364786 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563896 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001244961 |
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| Protein GI | 148270501 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.370984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAC TCATATTCTC GAGAGAAACG GATTGCAGAT ACTGCTACAA GTGCTTGAGA
AACTGTCCTG TTAAAGCCAT ATCTTTCAAA TCGGGAAAAT CAACAGTTTT AGAAGAAGAA
TGTGTTTTTT GCGGGTTATG TTTAGATATC TGTCCTCAGA ATGCAAGAAG CTATCGGAAA
GACGTTGGAA GATTTCTGAG TTTGTCCAGA CCGTTTCTTG TTTCCATAGC ACCGTCGTTT
TTCGCTTACT TTGAAAATCC TCTGAGAGTT ATCGGTATTT TGAAAGAGAT GGGTGCTGTG
GTTGTTCAGG AAACAGCCGT GGGTGCGGAG ATCGTTTCCA GAAGGTACGA AGAGGTCTTT
GAAAAACACC CTGGTCCCCT CATAACAACT GCCTGTCCCG TGGTTGTTAA TCTCGCTGAG
AAACATTTTC CTAATGTTTT GAAATATTTT GCACCTGTTG ATTCTCCTCT GATGGCGCAC
GCGAAGTTTT TGAAGACACG ATACGGTGAC TTCCCAATTG TGTTTGTTGG ACCATGCATA
GCAAAGAAAT CCGAAAGCGA CCTCGTTGAC GTTGCACTCA CCTTCGAAGA ACTCGAGGAG
ATCCTCGAAG AAAGAGAAGG AAAAGAAGCT CTTCCGGACG GTCCGTATCC AGACAGGGCT
CGGTTTTATC CGACAACGGA CGGTATAGGC TACACCGTTT CTGTCCCATG GGAAAAAAAG
CTCGTGGTTG AAGGTATCGA AAACCTGATG AGAGTCTTTT CCAGGATAGA TGAATACAAA
AGTGTTTTCA TAGAGGCTTC CGCATGCTAC GGCAGCTGTT TGAACGGACC TGTGATGAAG
AAAAAAAGCA ACGGAAAAGA AAGGCTTCTT GAATGGCAGA AGAAACTCCC AAAAGAACCG
AAGGTGAATC ACCTCAAGAT CGATACCTTC AGGAGCTACA GAAACAAGTC CAGGAACGTG
GAAGTTCCAG AAGAGGAAAT AAAAAAGGTT CTCGTGTCCA TAGGAAAAGA CGATCCGTCC
AAAGAGTTGA ACTGCGGTGC GTGTGGATAC GATTCGTGCC GTGAAAAAGC CAGGGCCGTG
GTCCTTGGAA AAGCGGAAAA GGAGATGTGC TTTGTGTACC TGCTTGATCT GGTCAAATCT
TCCAGTTACA GAGTCGTTGA AGAATCTCCA AACGCTGTAT TCGTTTTGAA AGACGAAAAA
GTGATCTACA GAAACAGGGT AGCTGGGGAA CTGATCCAGA AGGATCCTGG GATCCTGGAA
TGTGCGAAGG GCTCTGTGGG AGAAACTCTC AACATCGAAG GGAAGAGATT CTTCTTTGTG
AAGGAATTTT CTCTCGAGGA TGGAGAAGAA GTCATCATGC TAGTGGATAT TACGCAGGAA
AAACTGAAAG ACGAAGAGCT CGACAAGGTA AAAAAGGAAA CACTCAGAAA GGTCGAAGAA
ATGCTGAACA AACAAATGAG AATCGCTCAA GAAATTGCTG GGATACTCGG TGAATCCATC
GCGGAAACCA AGAGCAGTTT CATGGAGCTG AAGAGGTTCA TGGAGGGAGA AAATGCTGAC
CTGTGA
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| Protein sequence | MAELIFSRET DCRYCYKCLR NCPVKAISFK SGKSTVLEEE CVFCGLCLDI CPQNARSYRK
DVGRFLSLSR PFLVSIAPSF FAYFENPLRV IGILKEMGAV VVQETAVGAE IVSRRYEEVF
EKHPGPLITT ACPVVVNLAE KHFPNVLKYF APVDSPLMAH AKFLKTRYGD FPIVFVGPCI
AKKSESDLVD VALTFEELEE ILEEREGKEA LPDGPYPDRA RFYPTTDGIG YTVSVPWEKK
LVVEGIENLM RVFSRIDEYK SVFIEASACY GSCLNGPVMK KKSNGKERLL EWQKKLPKEP
KVNHLKIDTF RSYRNKSRNV EVPEEEIKKV LVSIGKDDPS KELNCGACGY DSCREKARAV
VLGKAEKEMC FVYLLDLVKS SSYRVVEESP NAVFVLKDEK VIYRNRVAGE LIQKDPGILE
CAKGSVGETL NIEGKRFFFV KEFSLEDGEE VIMLVDITQE KLKDEELDKV KKETLRKVEE
MLNKQMRIAQ EIAGILGESI AETKSSFMEL KRFMEGENAD L
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