Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1368 |
Symbol | |
ID | 5169971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1359724 |
End bp | 1361604 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640563893 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001244958 |
Protein GI | 148270498 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [COG3411] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAGA ACGCGAAAGA GTTCGTCCAG TACGCAAACA AACTGAAAAC CCTGAGAGAG AAAAAACTGA ACGGTGTCTC TATATACGTC TGCGTCGGAA CTGGTTGTAC TGCGAAAGGT GCTCTCAAAG TTTACAGCGC TTTCGAAGAA GAGCTCAAAA AGAGAAACCT CCTCGGACAG GTCACGCTGG AAAAGATCGA TGATGACAAA GTCACGTTGA ACAGAACAGG GTGCTGTGGA AGGTGTTCTT CCGGTCCCCT CGTGAAGATC ATGCCCTACA GGTTCTTCTA TTCAAATGTT GTACCCGAAG ATGTCCCGGA GATCGTGGAC AGAACCGTCC TCAAGGGTGA GCCCATAGAA AGACTCTTTC TGACGGATCC CCTCACGGGA GAAAAGGTTC CCAGAATAGA GGACACCACG CTTTTCAAAA ACCAGGATTT CTACATCATG GAAGCCATAG GTGAGTCCGA GTGTGACAGT ATAGAAGACT ACATCGCACG GGGTGGATAC GAGTCTCTCG TCAAAGCCCT CACTTCAATG ACACCGGAAG AAATCATAGA AACGGTGAAG GCATCCGGTC TCAGAGGAAG AGGTGGAGGA GGATTTCCAA CAGGTCTCAA ATGGGAATTC ACCAGAAAAG CGCAGGGTGA TATAAAATTC GTCGTCTGCA ACGGTGACGA AGGAGATCCC GGAGCGTTCA TGAACAGAAC CCTCCTCGAG AGAGACCCCC ATCTCGTTCT CGAGGGAATG ATAATAGCGG GTTACGCGGT TGGTGCGCAG AAAGGCTACG CTTACATAAG GGCTGAGTAT CCGTTCGCAG TCAAAATGTT CAAAAAAGCC ATAGAAGATG CCAGAAAACT CGGTCTTCTT GGGGAAAACA TACTCGGTAC TGGATTCTCT TTCGACCTCG AGGTGAAGGA AGGTGCCGGC GCGTTCGTCT GCGGTGAAGA AACAGCACTG CTCGCTTCCA TAGAAGGGAA AAGAGGTATG CCCAGACCAA AGCCACCGTT CCCGGCTCAA TCCGGTCTCT GGGGTAAACC CACCCTCATA AACAACGTGG AAACATACGC GAACATACCA AGAATACTCA GAGACGGTGT GGAAAACTAC AGAAAACGCG GAACGGAAAA CTCACCGGGA ACCAAGATGT TCTCCGTTGC CGGTCCCCTC AAAGCCACCG GTATCATCGA AGTTGAATTC GGCACCACCT TGAGAGATAT CATCTACAAC ATATGTGGAG GATTCGTTGA AGGAGAAGAG TTCAAAGCGG TTCAGATTGG AGGACCGTCC GGAGCGTGTC TTTCCGAAGA TTTCATCGAC ATGCCCCTCG ATTACGACAC ACTGAAGAAA GCTGATGCGA TGGTAGGATC CGGTGGAATA GTCGTGATTA CAAAGAAAAC GTGTATGGTA GAGGTTGCAA GGTTCTTCCT CGATTTCACC AAGAGGGAAT CCTGTGGAAA GTGCGTGCCG TGCAGGGAAG GCACCATGCA GGCGTACAAC ATATTGGAAA AGTTCACCCA CGGAAAAGCT ACATACGAGG ATCTCAAAGC TCTCGAACAC CTCTCAAAAA CAATAAAGAC CGCTTCTCTC TGTGGGCTCG GAAAGACCGC TCCCAACCCC ATTCTCAGTA CCCTGAAGCT CTTCAGAGAG GAGTACATTG CACACATCGA AGGAGAATGT CCAAGCGGAA TGTGTACGGC GTTCAAGAAA TACGTCATCA ACCCGGATAT CTGTAAAGGC TGTGGACTCT GTGCCAGATC CTGTCCACAG AACGCCATAA CCGGAGAAAG AGGAAAACCG TACACGATAA ATCAGGAGAA GTGTGTCAAG TGCGGTCTCT GTGCGAGTAA ATGTCCGTTC AAAGCCATAG AGCTTGTCTG A
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Protein sequence | MFKNAKEFVQ YANKLKTLRE KKLNGVSIYV CVGTGCTAKG ALKVYSAFEE ELKKRNLLGQ VTLEKIDDDK VTLNRTGCCG RCSSGPLVKI MPYRFFYSNV VPEDVPEIVD RTVLKGEPIE RLFLTDPLTG EKVPRIEDTT LFKNQDFYIM EAIGESECDS IEDYIARGGY ESLVKALTSM TPEEIIETVK ASGLRGRGGG GFPTGLKWEF TRKAQGDIKF VVCNGDEGDP GAFMNRTLLE RDPHLVLEGM IIAGYAVGAQ KGYAYIRAEY PFAVKMFKKA IEDARKLGLL GENILGTGFS FDLEVKEGAG AFVCGEETAL LASIEGKRGM PRPKPPFPAQ SGLWGKPTLI NNVETYANIP RILRDGVENY RKRGTENSPG TKMFSVAGPL KATGIIEVEF GTTLRDIIYN ICGGFVEGEE FKAVQIGGPS GACLSEDFID MPLDYDTLKK ADAMVGSGGI VVITKKTCMV EVARFFLDFT KRESCGKCVP CREGTMQAYN ILEKFTHGKA TYEDLKALEH LSKTIKTASL CGLGKTAPNP ILSTLKLFRE EYIAHIEGEC PSGMCTAFKK YVINPDICKG CGLCARSCPQ NAITGERGKP YTINQEKCVK CGLCASKCPF KAIELV
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