Gene Tpet_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1362 
Symbol 
ID5171640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1351730 
End bp1353169 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content49% 
IMG OID640563887 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001244952 
Protein GI148270492 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCTG TCGTCATAGG TGGCGGAGTG TTTGGTTCTC TGATAGCGCG AGAGTTAACG 
AAGTACGATC TGGAAGTGAC TCTCATAGAG AAGAACTTGG ATGTAGGCTG GGGAGTAACA
AAGGCGAATT CAGCCATCGT TCACGCTGGT TACGACGATC CACCTGAAAG CGTTCGTGCA
CAGTTTTGCG CGTCAGGCAA TGCAATGTAC GAAGACCTCT CGAAAGAGCT GGATTTTGAT
TTCAAAAGAA TTGGATCTTT CGTAGTGGCG TTCAACGATG AAGAACTGAA GGAACTCGAA
CGTCTCCTAA AACAGGGCGA AGAAAACGGC GTTCCAGGTT TGACCATCCT GGAAAGAGAC
GAAGTTCTTT CCATGGAGCC GAATCTGAAC CCAGAGGTCA AATATGCCCT CTACGCTCCC
ACTGCTGGCA TCACAGAACC CTGGATGGTT GCCATAGCAG CCGTGGAAAA CGCCGTCCAG
AACGGATTGA AACTCGTTCT TGGAGAAAGC GTCGTTGGCT TTGAGAAAGT CAACGGTCGA
GTGAGGAAGA TTCACACCAG CAAAGGCGAA TACGAAGCGG ATATCGTGAT AAACTGCGCT
GGGCTCCACG CAGACGAGAT AGCGAAGTTA GCCGGTGCAG AGTACGTTCC CCTGCATCCG
AGAAAAGGCG AATACATTCT CCTTGATAAG AAACTTCAGG GTCTGGTAAA AAGGGTCATA
TTCCCCACAC CCACTAAGGT CTCGAAAGGG ATACTCGTTC TTCCCACAGT CGATGGTGGA
ATCCTTCTGG GACCAACTGC CGAGGACCTT CCCGAAGAGA TGAAGGACAG ACCCATAACC
ACCAGAGAAG GTCTCGAAAA AGTTCGAGAA TTCACAAAAA AACTCGTACC TTCCCTCGAT
TTCTCCCTCG TGGTGAAAAC CTTCTCAGGG CTGAGACCGG AAAGTCCACA AAAAGACTTC
TTCATAAAAG TGAGCGAGAC GGTGAAGAAC TTCGTGAACG TTATGGCAAC AAGATCTCCT
GGTCTCACAG CAGCGCCGGC GGTGGCAAAG TACGTTGTTG AAGAGTTGAT CCAGGAAAAA
ATGAGAATTC CTCTTGAGAA GAAAAAAGAC TTCAAACCAG AAAGAAAGAG AATCGTTCAC
TATTCGGAAC TTCCTCTTGA AGAGTGGAGA AGGGAAATAG AAAGAGATCC ACGTGCGGGA
AGACTCGTTT GCTTCTGCAA CGAAGTGACA GAGAAGGAAA TTGTCGAGGC GATAAGAAGA
GGGGCGAGGA CCCTTGATGG GATCAAGTTC AGAACAAGAG CGATGTTTGG GAGGTGTCAG
GGGGGCTTCT GCATGGCTCG AATTCTCAAG ATTCTGGAGA GAGAACTCGG TGTGGATATG
TCGGAAATAA GAATGAAATC GGAGAACAGC TGGGTTGTGA ACGGGAAGGT GAGAGAATGA
 
Protein sequence
MKAVVIGGGV FGSLIARELT KYDLEVTLIE KNLDVGWGVT KANSAIVHAG YDDPPESVRA 
QFCASGNAMY EDLSKELDFD FKRIGSFVVA FNDEELKELE RLLKQGEENG VPGLTILERD
EVLSMEPNLN PEVKYALYAP TAGITEPWMV AIAAVENAVQ NGLKLVLGES VVGFEKVNGR
VRKIHTSKGE YEADIVINCA GLHADEIAKL AGAEYVPLHP RKGEYILLDK KLQGLVKRVI
FPTPTKVSKG ILVLPTVDGG ILLGPTAEDL PEEMKDRPIT TREGLEKVRE FTKKLVPSLD
FSLVVKTFSG LRPESPQKDF FIKVSETVKN FVNVMATRSP GLTAAPAVAK YVVEELIQEK
MRIPLEKKKD FKPERKRIVH YSELPLEEWR REIERDPRAG RLVCFCNEVT EKEIVEAIRR
GARTLDGIKF RTRAMFGRCQ GGFCMARILK ILERELGVDM SEIRMKSENS WVVNGKVRE