Gene Tpet_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1360 
Symbol 
ID5170139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1350104 
End bp1350520 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content46% 
IMG OID640563885 
Producthypothetical protein 
Protein accessionYP_001244950 
Protein GI148270490 
COG category[S] Function unknown 
COG ID[COG3862] Uncharacterized protein with conserved CXXC pairs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00743628 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAAA ATGTCGTTTG CGTTCAGTGC CCGATCGGGT GTAAAATTAA GGTGGAGCTA 
ACTGAAGACG GCCACATAAA ATCCATCACA GGAAACAGGT GTCCACGGGG TGTTGAATAC
GCAAAAGATG AGATAAAGGA TCCAAAAAGG GTTGTTCCGA CGAGCATCAG GGTACTGAAC
GGAGAACTTC CACTCGCGTC CGTTAAAACA GACAAACCGA TTCCGAAAAG ATTCATACCG
GAACTCATGA AAATCGTCAG AGAAATCAGG GTGGAAGCCC CCGTGAAGGC CGGTGATGTT
GTTTTAAGGG ATCTTTTTGG AACGGGAGCG AATCTTGTTG TAACAAGAAC GGTGAGGAGG
TTAGAAGATG GATCCAAAGA AATTCAAAAG GATAGCATTG GTGGGAGCAA CGGTTAA
 
Protein sequence
MFKNVVCVQC PIGCKIKVEL TEDGHIKSIT GNRCPRGVEY AKDEIKDPKR VVPTSIRVLN 
GELPLASVKT DKPIPKRFIP ELMKIVREIR VEAPVKAGDV VLRDLFGTGA NLVVTRTVRR
LEDGSKEIQK DSIGGSNG