| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1359 |
|---|
| Symbol | |
|---|
| ID | 5170043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1349758 |
|---|
| End bp | 1350153 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640563884 |
|---|
| Product | CoA-binding domain-containing protein |
|---|
| Protein accession | YP_001244949 |
|---|
| Protein GI | 148270489 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1832] Predicted CoA-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00343617 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCAA AGAAATTCAA AAGGATAGCA TTGGTGGGAG CAACGGTTAA TCCAAGAAAG
TACGGAAACG TGATCCTCAA AGATCTGGTC TCCAAGGGAT TCGAAGTCCT ACCGGTGAAT
CCCAAATACG ACGAAATAGA AGGCCTCAAA GTTTACAAAA ACGTGGAAGA GCTTCCCAGA
GATATCGATG TGATAGTCTT CGTTGTTCCG CCCGAAGTCG CACTTGAAGA AACAAAAAAG
GCGTACAACG CAGGTTTCAG AAGGTTCTGG TATCAACCGG GAGCGTTCTC AGAAGAAATC
AAAGGATTCC TCGATTCTTT GAAAGACGTG GAATACTCCG CCGAAAAGTG TATCATGGTA
GAAACCTCAT CTTCCAGAGG GTTCTTGAAC TTGTAG
|
|---|
| Protein sequence | MDPKKFKRIA LVGATVNPRK YGNVILKDLV SKGFEVLPVN PKYDEIEGLK VYKNVEELPR
DIDVIVFVVP PEVALEETKK AYNAGFRRFW YQPGAFSEEI KGFLDSLKDV EYSAEKCIMV
ETSSSRGFLN L
|
|---|
| |