| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1345 |
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| Symbol | |
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| ID | 5171618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1336164 |
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| End bp | 1336586 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563870 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001244935 |
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| Protein GI | 148270475 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00066539 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCCTCAA GTGACTTTGA AGAAGCATAC CGTGAACTCG AAGAAGGAAA ACTGGAGAGT
GCCCTGGAAA AATTTTTGAA AATAGCCGAA AAAGACCAAT CGGTAGAGGT TTGGGTCAAC
ATAGGAAACA TCTACAGAAG AATGAATCTT CTGGCGAAGG CTATTGAAAG CTACAAAAGA
GCACTGGAAA TAGATCAAAA AAATCCAGTC GTTCTCTTCA ATCTGGGAAG CGCATACTAT
CAGATGGGGA AATTTTTCGA GGCTCTGAAA CTGCTGGAAA AGGCCGAGGA ACAGGGATTG
ACAGATCCCA GAGTGAAGGT AGTGAAAGCC CTGTGCAAGA TAAAGCTCAA CCTTCCAGAC
CCCATGGAAG GACTCGATGA AGACCAGAAG AGGATTGTAA AAGACCTAGT GAAAAATGGT
TGA
|
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| Protein sequence | MASSDFEEAY RELEEGKLES ALEKFLKIAE KDQSVEVWVN IGNIYRRMNL LAKAIESYKR
ALEIDQKNPV VLFNLGSAYY QMGKFFEALK LLEKAEEQGL TDPRVKVVKA LCKIKLNLPD
PMEGLDEDQK RIVKDLVKNG
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