| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1338 |
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| Symbol | rpmA |
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| ID | 5170021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1328424 |
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| End bp | 1328675 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563863 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001244928 |
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| Protein GI | 148270468 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000532816 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCATA AAAAGAGTGG TGGTGTTGCG AAGAACGGTA GAGACAGTCT TCCAAAATAT
CTGGGAGTCA AAGTGGGAGA TGGTCAGATT GTCAAAGCAG GAAACATCCT CGTGAGACAG
AGAGGAACAA GATTTTACCC CGGAAAAAAC GTTGGTATGG GAAGAGATTT CACTCTGTTC
GCACTGAAGG ATGGCAGGGT GAAGTTTGAA ACGAAAAACA ACAAAAAGTA TGTGAGCGTT
TATGAGGAGT GA
|
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| Protein sequence | MAHKKSGGVA KNGRDSLPKY LGVKVGDGQI VKAGNILVRQ RGTRFYPGKN VGMGRDFTLF
ALKDGRVKFE TKNNKKYVSV YEE
|
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