| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1332 |
|---|
| Symbol | |
|---|
| ID | 5170796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1325138 |
|---|
| End bp | 1325383 |
|---|
| Gene Length | 246 bp |
|---|
| Protein Length | 81 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640563857 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001244922 |
|---|
| Protein GI | 148270462 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0759] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000174281 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TGCTTATAAT GCTTATAAGG TTTTATCAGA GATACATTTC ACCTCTCAAA
CCTCCAACCT GCAGGTTCAC TCCAACCTGT TCGAATTATT TCATACAGGC CCTGGAGAAA
CATGGGCTCT TGAAGGGGAC CTTCCTGGGC CTCAGGCGTA TTCTCCGATG CAATCCCCTA
TCAAAAGGTG GTTACGATCC TGTTCCCGAG GAATTTTCAT TCAAACCAAG GAGGCGATGG
TCTTGA
|
|---|
| Protein sequence | MKKLLIMLIR FYQRYISPLK PPTCRFTPTC SNYFIQALEK HGLLKGTFLG LRRILRCNPL
SKGGYDPVPE EFSFKPRRRW S
|
|---|
| |