| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1322 |
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| Symbol | rho |
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| ID | 5170743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1317470 |
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| End bp | 1318753 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563847 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001244912 |
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| Protein GI | 148270452 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000239055 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAGAGG AACAGAAAGC CATTAGCATA TCAGAGCTGG AATCCATGAA CATAAAACAG
CTCTACGAGA TAGCAAAATC CCTGGGTATT CCTCGATACA CTTCTATGCG AAAAAGAGAC
TTGATTTTTG CCATTTTGAA AGCCCAAACC GAATCCACCG GTTATTTTTT CGGTGAAGGT
GTACTGGAAA TTCATCCTGA AGGTTTTGGT TTTTTGAGAA GGCTCGAGGA CAACCTTCTT
CCAAGCAACG ATGATATATA CATATCCCCT TCTCAGATAA GGAAATTCAA CCTGAACACG
GGAGATATAA TTTCCGGGGT TATAAGGAAA CCGAAAGAAG GCGAAAAGTA CTTCGCCATG
ATAAAAATCG AAGCGATAAA TTATCGACCA GTCGAAGCGG TCAACGACAG AGTAAACTTT
GACAACTTGA CTCCGGATTA CCCCAGAGAA CGCTTCATCC TTGAAACCAA CCCAAAGATA
TATTCCACCA GATTAATAGA TCTTTTCGCT CCTATTGGGA AGGGACAAAG AGGAATGATC
GTGGCACCTC CAAAAGCCGG TAAAACGACT ATCCTCAAAG AAATAGCGAA CGGTATCGCT
GAAAACCACC CGGATACCAT AAGAATAATC TTACTGATCG ATGAAAGACC GGAAGAGGTT
ACGGATATAA AAGAGTCAAC GAATGCAATC GTCATAGCGG CTCCCTTTGA CATGCCCCCA
GACAAACAGG TAAAGGTCGC CGAGCTCACC CTGGAAATGG CAAAGAGACT GGTGGAATTC
AATTACGATG TTGTTATACT CCTTGACAGT CTGACAAGAC TTGCTCGAGT GTACAACATA
GTAGTTCCTC CCAGCGGAAA ACTTCTAACG GGAGGTGTGG ATCCAGCCGC CCTTTACAAA
CCCAAGAGAT TCTTTGGAGC GGCGAGAAAC ACCCGTGAAG GTGGAAGCCT CACGATCATC
GCTACCGCTC TTGTGGAAAC GGGTTCGAAG ATGGACGAGG TCATATTCGA GGAATTCAAA
GGAACAGGTA ACATGGAGCT GGTTCTCTCA AGACAGCTGG CGAACAAGAG AATCTTCCCA
GCCATAAATC TTTTGCTTTC CGGAACAAGA AGGGAAGAGC TGTTGCTCGA TGAAGAGACT
CTCAAGAAGG TTTGGCTCTT ACGAAGGATG CTCTCTGCAA TGACGGAAGA AGAAGGTTTG
ACGCTCATAC TGAACAAACT TTCCGAAACT TCTTCAAACG AAGAATTTCT GAAATTGATA
GACAAGGAAA AAGCAAGATA CTGA
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| Protein sequence | MTEEQKAISI SELESMNIKQ LYEIAKSLGI PRYTSMRKRD LIFAILKAQT ESTGYFFGEG
VLEIHPEGFG FLRRLEDNLL PSNDDIYISP SQIRKFNLNT GDIISGVIRK PKEGEKYFAM
IKIEAINYRP VEAVNDRVNF DNLTPDYPRE RFILETNPKI YSTRLIDLFA PIGKGQRGMI
VAPPKAGKTT ILKEIANGIA ENHPDTIRII LLIDERPEEV TDIKESTNAI VIAAPFDMPP
DKQVKVAELT LEMAKRLVEF NYDVVILLDS LTRLARVYNI VVPPSGKLLT GGVDPAALYK
PKRFFGAARN TREGGSLTII ATALVETGSK MDEVIFEEFK GTGNMELVLS RQLANKRIFP
AINLLLSGTR REELLLDEET LKKVWLLRRM LSAMTEEEGL TLILNKLSET SSNEEFLKLI
DKEKARY
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