| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1312 |
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| Symbol | secY |
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| ID | 5170868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1311491 |
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| End bp | 1312786 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563837 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001244902 |
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| Protein GI | 148270442 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000457849 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGCAAG CTTTTAAAAA CGCTTTTAAA ATACCAGAGC TTCGTGACAG GATCATCTTC
ACGTTCCTCG CTTTGATCGT TTTCAGGATG GGGATTTACA TCCCCGTTCC TGGATTGAAT
CTGGAAGCGT GGGGGGAAAT CTTCAGAAGA ATAGCGGAAA CCGCTGGTGT CGCTGGAATT
TTGAGTTTCT ACGATGTGTT CACTGGAGGA GCTTTGAGTC AGTTCTCTGT TTTCACCATG
AGTGTCACTC CATACATAAC CGCGTCGATC ATCCTTCAGC TTCTGGCATC TGTTATGCCT
TCGCTCAAGG AGATGCTCAG AGAGGGTGAA GAGGGAAGAA AGAAGTTCGC AAAGTACACA
AGGCATCTCA CACTCTTGAT AGGTGGTTTT CAGGCTTTCT TTGTTTCCTT TTCGCTTGCA
AGATCGAACC CGGACATGAT AGCTCCCGGT GTTAATGTGC TCCAGTTCAC CATTCTCTCC
ACCATATCCA TGCTTGCCGG AACCATGTTT CTGCTCTGGC TCGGTGAAAG GATCACAGAA
AAGGGTATAG GAAACGGTAT TTCGATCCTG ATCTTCGCGG GAATAGTGGC AAGATACCCA
AGCTACATTA GACAGGCATA TCTCGGTGGT CTGAATCTTT TGGAATGGAT CTTTCTCATA
GCTGTTGGCC TTATCACGAT ATTTGGAATC ATACTCGTTC AGCAGGCAGA GAGAAGGATA
ACCATACAAT ACGCAAGAAG GGTCACAGGA AGGAGAGTGT ATGGAGGAGC CAGCACGTAT
CTTCCTATAA AGGTGAACCA AGGTGGTGTG ATCCCCATCA TCTTTGCGAG TGCCATAGTT
TCAATACCTT CTGCGATCGC TTCAATAACG AACAGTGGAA CTCTTCAAAA TCTCTTCAAA
GCAGGTGGAT TCCTCTACCT TCTCGTTTAC GGATTGCTGG TGTTCTTCTT CACTTACTTC
TATAGCGTTG TGATTTTCGA TCCTAAGGAA ATCTCTGAAA ACATTCAGAA GTACGGAGGT
TACATCCCGG GCTTGAGACC TGGAAGATCA ACGGAGCAGT ACCTCCACAG AGTTCTGAAC
AGAGTGACGT TTATCGGAGG GGTCTTCCTC GTAGTTATAG CCCTTCTTCC CTACCTGATA
CAGGGAGCCA TAAAGGTGAA CGTCTGGATT GGAGGCACTT CCGCTTTGAT CGCTGTGGGA
GTCGCTCTTG ACATCATTCA ACAGATGGAA ACCCATATGG TGATGAGACA CTACGAAGGA
TTCATCAAAA AGGGTAGAAT AAGGGGGAGA AGATGA
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| Protein sequence | MWQAFKNAFK IPELRDRIIF TFLALIVFRM GIYIPVPGLN LEAWGEIFRR IAETAGVAGI
LSFYDVFTGG ALSQFSVFTM SVTPYITASI ILQLLASVMP SLKEMLREGE EGRKKFAKYT
RHLTLLIGGF QAFFVSFSLA RSNPDMIAPG VNVLQFTILS TISMLAGTMF LLWLGERITE
KGIGNGISIL IFAGIVARYP SYIRQAYLGG LNLLEWIFLI AVGLITIFGI ILVQQAERRI
TIQYARRVTG RRVYGGASTY LPIKVNQGGV IPIIFASAIV SIPSAIASIT NSGTLQNLFK
AGGFLYLLVY GLLVFFFTYF YSVVIFDPKE ISENIQKYGG YIPGLRPGRS TEQYLHRVLN
RVTFIGGVFL VVIALLPYLI QGAIKVNVWI GGTSALIAVG VALDIIQQME THMVMRHYEG
FIKKGRIRGR R
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