Gene Tpet_1311 details

Gene Information

• Locus tag: Tpet_1311
• Symbol: rplO
• ID: 5170872
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 1311046
• End bp: 1311489
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640563836
• Product: 50S ribosomal protein L15
• Protein accession: YP_001244901
• Protein GI: 148270441
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000000196543
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCTTG AAGATCTGAG GCCAACTCCC GGGGCAATGA AAAAGAGGAA AAGAGTCGGT 
AGAGGTCCCG GATCTGGGCA CGGAAAAACC AGTGGAAGGG GACACAAAGG ACAGAAAGCC 
AGAGGAAGCG GAAAGGTTCA CATCTGGTTT GAGGGTGGAC AGACGCCTCT GCACAGAAGA 
CTCCCCAAGA GAGGATTCAA CAACATAAAC AAAAAGGTTT ATGCGGTTGT TAATGTCAAA 
GTTCTCGAAG AAAGGTTCGA AGCCAACGAA GAAGTAACTC CTGAAAAACT CATCGAAAGA 
AAGATCATAA AAGATCTGAA AGATGGGATA AAGATCCTCG GAGACGGAGA ACTCACCAAG 
CCACTGGTAG TCAAAGCACA CGCTTTCAGT AAGAGCGCTG TAGAAAAGAT AGAAAGTGCT 
GGTGGTAAGG CTGAGGTGAT ATGA 

 

Protein sequence

MRLEDLRPTP GAMKKRKRVG RGPGSGHGKT SGRGHKGQKA RGSGKVHIWF EGGQTPLHRR 
LPKRGFNNIN KKVYAVVNVK VLEERFEANE EVTPEKLIER KIIKDLKDGI KILGDGELTK 
PLVVKAHAFS KSAVEKIESA GGKAEVI