Gene Tpet_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1304 
SymbolrplE 
ID5170886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1308150 
End bp1308731 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content44% 
IMG OID640563829 
Product50S ribosomal protein L5 
Protein accessionYP_001244894 
Protein GI148270434 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000240969 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAAAGA TTGAGGGAGG AATCGGTATG AGATATGAAT ACGTTCCTCT GAAAGATCAG 
TACGAAAAGG AAATAGTACC CGCTTTGATG AAAGAGTTCA ACTACAAAAA CATCCATCAG
GTTCCAAAGT TGGTCAAAAT CGTTATAAAC ATGGGAATTG GCGAAGGTTC CAGAAACTAC
GACCTCATAG AACGACACGC GAACGAGCTC GCAAAAATTA CAGGGCAGAA ACCAATCGTT
ACAAGGGCGA GGAAGAGTAT TTCCAACTTC AAGATAAGGA AGGGAATGCC GATAGGTTTG
AAAGTAACCC TCAGAGGAGC AAGGATGTAC AATTTTCTCT ACAAACTCAT AAACATCGTG
CTGCCCAAGG TGAGGGACTT CAGGGGACTC GATCCCAATT CCTTTGACGG AAGAGGGAAT
TACTCCTTTG GTCTTTCAGA ACAGCTGGTT TTCCCTGAAC TGAGTCCGGA TGAAGTCAGA
AGAATACAAG GAATGGACAT CACCATCGTC ACAACTGCAA AGACAGATCA GGAAGCCAGA
AGGCTTCTTG AGCTCTTTGG CATGCCTTTC AAGAGAGGAT AA
 
Protein sequence
MTKIEGGIGM RYEYVPLKDQ YEKEIVPALM KEFNYKNIHQ VPKLVKIVIN MGIGEGSRNY 
DLIERHANEL AKITGQKPIV TRARKSISNF KIRKGMPIGL KVTLRGARMY NFLYKLINIV
LPKVRDFRGL DPNSFDGRGN YSFGLSEQLV FPELSPDEVR RIQGMDITIV TTAKTDQEAR
RLLELFGMPF KRG