Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1304 |
Symbol | rplE |
ID | 5170886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1308150 |
End bp | 1308731 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640563829 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001244894 |
Protein GI | 148270434 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000240969 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACAAAGA TTGAGGGAGG AATCGGTATG AGATATGAAT ACGTTCCTCT GAAAGATCAG TACGAAAAGG AAATAGTACC CGCTTTGATG AAAGAGTTCA ACTACAAAAA CATCCATCAG GTTCCAAAGT TGGTCAAAAT CGTTATAAAC ATGGGAATTG GCGAAGGTTC CAGAAACTAC GACCTCATAG AACGACACGC GAACGAGCTC GCAAAAATTA CAGGGCAGAA ACCAATCGTT ACAAGGGCGA GGAAGAGTAT TTCCAACTTC AAGATAAGGA AGGGAATGCC GATAGGTTTG AAAGTAACCC TCAGAGGAGC AAGGATGTAC AATTTTCTCT ACAAACTCAT AAACATCGTG CTGCCCAAGG TGAGGGACTT CAGGGGACTC GATCCCAATT CCTTTGACGG AAGAGGGAAT TACTCCTTTG GTCTTTCAGA ACAGCTGGTT TTCCCTGAAC TGAGTCCGGA TGAAGTCAGA AGAATACAAG GAATGGACAT CACCATCGTC ACAACTGCAA AGACAGATCA GGAAGCCAGA AGGCTTCTTG AGCTCTTTGG CATGCCTTTC AAGAGAGGAT AA
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Protein sequence | MTKIEGGIGM RYEYVPLKDQ YEKEIVPALM KEFNYKNIHQ VPKLVKIVIN MGIGEGSRNY DLIERHANEL AKITGQKPIV TRARKSISNF KIRKGMPIGL KVTLRGARMY NFLYKLINIV LPKVRDFRGL DPNSFDGRGN YSFGLSEQLV FPELSPDEVR RIQGMDITIV TTAKTDQEAR RLLELFGMPF KRG
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