| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1295 |
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| Symbol | rplB |
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| ID | 5171594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1304239 |
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| End bp | 1305069 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640563820 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_001244885 |
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| Protein GI | 148270425 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000122183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACTCA AAAGATTCAA ACCGGTTACC CCGGGAAGGC GTTTTATGGT TATCTCCGAT
TTTTCGGATA TCACAAAGAC AGAACCTGAA AAGTCGTTGC TCGCACCTCT CAAGAAAACA
GGTGGAAGGA ATCATCACGG AAGAGTTACT GTAAGGCACA GAGGTGGCGG GCACAAGAGA
AGATACAGAA TAATAGATTT CAAGAGATAC GACAAAGCTG GAATTCCTGC GAAAGTGCTG
GCCATTGAAT ACGATCCCAA CAGATCAGCC AGAATAGCGC TTCTCCTTTA CGCTGATGGA
GAGAAAAGAT ATATTCTGGC ACCCAAAGGT GTGAACGTGG GAGACACTCT CATGAGCGGA
CCCGATGCGG AAATAAGGCC AGGAAACGCA CTTCCTCTTG AGAAGATACC CGTCGGTACC
CTTGTCCACA ACGTGGAGTT CACACCGGGC AAGGGTGGTC AGATCGCAAG AGCAGCTGGT
ACATACTGTC AGATCATGGC GAAGGAAGGG AATTACGCTC TGCTCAGAAT GCCTTCTGGA
GAACTGAGAA AGGTACACAT CAAATGCTAC GCCACCGTCG GTGTTGTGGG CAACGAAGAT
CACAAGAACG AAGTCCACGG AAAGGCTGGA AGAGTGAGAT GGCTCGGTAG AAGACCGCAT
GTCAGAGGAG TTGCCATGAA TCCGGTGGAT CACCCGCACG GTGGTGGTGA AGGAAGAGGT
AAAGGTCACC ATCCAACGAG TCCATGGGGC CTGCCAACCA AGGGCTACAA GACGAGACGT
GGAAAGAGAC CTTCTGACAA ATTCATCGTC AGGAGAAGGA ATGAAGCGTA A
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| Protein sequence | MGLKRFKPVT PGRRFMVISD FSDITKTEPE KSLLAPLKKT GGRNHHGRVT VRHRGGGHKR
RYRIIDFKRY DKAGIPAKVL AIEYDPNRSA RIALLLYADG EKRYILAPKG VNVGDTLMSG
PDAEIRPGNA LPLEKIPVGT LVHNVEFTPG KGGQIARAAG TYCQIMAKEG NYALLRMPSG
ELRKVHIKCY ATVGVVGNED HKNEVHGKAG RVRWLGRRPH VRGVAMNPVD HPHGGGEGRG
KGHHPTSPWG LPTKGYKTRR GKRPSDKFIV RRRNEA
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