| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1290 |
|---|
| Symbol | |
|---|
| ID | 5170977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1301020 |
|---|
| End bp | 1302222 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640563815 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_001244880 |
|---|
| Protein GI | 148270420 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000272484 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGG AAAAATTTGT AAGAACAAAA CCGCATGTTA ACGTTGGAAC GATTGGACAT
ATCGACCACG GAAAGTCCAC ACTGACAGCC GCTATAACAA AGTACCTTTC TCTCAAGGGA
CTTGCCCAGT ATGTTCCTTA CGACCAGATC GACAAGGCTC CTGAGGAAAA GGCAAGAGGA
ATCACCATCA ACATCACACA CGTTGAGTAT CAGACCGAAA AGAGGCACTA CGCTCACATT
GACTGTCCTG GTCACGCGGA CTACATCAAG AACATGATCA CCGGAGCGGC TCAGATGGAC
GGAGCCATCC TTGTTGTCGC TGCAACCGAT GGTCCCATGC CTCAGACAAG GGAACACGTG
CTTCTTGCAA GGCAGGTTGA GGTTCCCTAC ATGATCGTCT TCATAAACAA GACGGACATG
GTTGACGATC CTGAACTCAT CGACCTCGTC GAGATGGAAG TGAGAGACCT TCTGAGCCAG
TACGGTTACC CTGGAGACGA AGTGCCAGTC ATAAGAGGTT CTGCTCTGAA AGCCGTCGAA
GCTCCTAACG ATCCGAATCA CGAAGCTTAC AAACCTATCC AGGAGCTCCT CGACGCTATG
GACAACTACA TTCCTGAGCC TCAGAGAGAA GTTGATAAGC CGTTCCTCAT GCCTATTGAG
GACGTGTTCT CAATCACAGG AAGAGGAACG GTTGTTACAG GAAGGATCGA AAGAGGAAGA
ATCAAACCCG GTGATGAAGT TGAGATCATA GGTCTCAGCT ACGAAATCAG GAAAACCGTT
GTTACAAGCG TGGAAATGTT CAGAAAGGAA CTCGATGAAG GAATCGCAGG AGACAACGTT
GGATGTCTGC TCAGAGGAAT CGACAAGGAC GAAGTTGAGA GAGGACAGGT TCTCGCAGCT
CCTGGAAGCA TCAAACCACA CAAGAGATTC AAGGCTCAGG TTTACGTCCT GAAGAAGGAA
GAGGGAGGAA GACATACACC GTTCACAAAA GGTTACAAAC CCCAGTTCTA CATAAGAACC
GCTGACGTTA CAGGGGAAAT CGTAGGACTT CCTGAAGGTG TCGAAATGGT TATGCCTGGA
GACCACGTCG AAATGGAAAT AGAACTCATC TACCCTGTCG CTATTGAAAA GGGACAGAGA
TTCGCTGTAA GAGAAGGTGG AAGAACAGTT GGAGCTGGTG TGGTCACAGA AGTCATCGAG
TGA
|
|---|
| Protein sequence | MAKEKFVRTK PHVNVGTIGH IDHGKSTLTA AITKYLSLKG LAQYVPYDQI DKAPEEKARG
ITINITHVEY QTEKRHYAHI DCPGHADYIK NMITGAAQMD GAILVVAATD GPMPQTREHV
LLARQVEVPY MIVFINKTDM VDDPELIDLV EMEVRDLLSQ YGYPGDEVPV IRGSALKAVE
APNDPNHEAY KPIQELLDAM DNYIPEPQRE VDKPFLMPIE DVFSITGRGT VVTGRIERGR
IKPGDEVEII GLSYEIRKTV VTSVEMFRKE LDEGIAGDNV GCLLRGIDKD EVERGQVLAA
PGSIKPHKRF KAQVYVLKKE EGGRHTPFTK GYKPQFYIRT ADVTGEIVGL PEGVEMVMPG
DHVEMEIELI YPVAIEKGQR FAVREGGRTV GAGVVTEVIE
|
|---|
| |