Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1275 |
Symbol | |
ID | 5170752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1287221 |
End bp | 1288381 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640563800 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001244865 |
Protein GI | 148270405 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000162613 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATCT TGTGGAAAGT GGCAGAGATC CATGGGACAC CCGCTTACGT GTACTTCGAG GAAACACTGC GAAAAAGAGC ACGTCTTGTA AAAGAGGTCT TCGAGGGGGT GAACCTCCTT CCGACGTTTG CTGTGAAGGC GAACAACAAT CCTGTTCTGC TGAGGATTCT AAGAGAAGAA GGTTTCGGAA TGGACGTGGT GACAAAAGGA GAACTCTTCG CGGCTAAACT GGCGGGAGTT CCTTCTCATT CCGTTGTATG GAACGGCAAT GGAAAGAGCG TGGATCAGAT GAAACACTTT TTGAGAGAAG GCGTGAGGAT CATCAACGTG GATTCGTTCG AGGAGATGGA GATCTGGAAG GAATTGAACC CGGAGGGCGT GGAGTATTTC ATTAGGGTGA ATCCGGAAGT CGACGCGAAG ACACATCCTC ACATCTCCAC CGGCTTGAAA AAGCACAAGT TCGGAATACC ACTGGAAGAT CTGGACCTAT TCATGGAAAG ATTCGGATCA ATGAACGTAA AAGGTCTTCA TGTTCACATA GGATCACAGA TAACACAGGT TGAACCCTTT GTGGAGGCCT TCGACAAAGT CGTCCGGGCT TCTGAAAGGT TTGGATTCGA AGAGATCAAC ATCGGTGGCG GCTGGGGAAT AAACTACAGT GGAGAAGAAC TCGACCTGTC CAGCTACAGA GAAAAGGTTG TTCCTGCCTT GAAGAGATTC AAAAGGGTCA TCGTTGAAAT AGGAAGGTAC ATCGTAGCAC CTTCCGGGTA CCTGCTTCTC AGGGTAGTAC TCGTCAAAAA AAGAAGTAAC AAAACGTTCG TTGTGGTCGA TGGAGGGATG AACACCCTCA TAAGACCGGC ACTTTACTCC GCGTATCACA GGGTTTTCGT TCTTGGAAAA CAGGGTAAAG AAGTGAGAGC GGATGTGGTT GGCCCTCTGT GCGAAAGCGG TGACGTGATC GCGTACGACC GGGAACTTCC AGAGGTCGAA CCGGGTGACA TCATCGTTGT GGAAAACGCG GGAGCCTACG GCTACACCAT GTCGAACAAC TACAACTCAA CCGTACGTCC GGCTGAGGTG CTCGTCGGAG AAGGCGGAGA GATCTCTCTG ATAAGAAGGA GAGAGACAGA GATGGACATC TTCAAAGACG TGGTGATGTG A
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Protein sequence | MDILWKVAEI HGTPAYVYFE ETLRKRARLV KEVFEGVNLL PTFAVKANNN PVLLRILREE GFGMDVVTKG ELFAAKLAGV PSHSVVWNGN GKSVDQMKHF LREGVRIINV DSFEEMEIWK ELNPEGVEYF IRVNPEVDAK THPHISTGLK KHKFGIPLED LDLFMERFGS MNVKGLHVHI GSQITQVEPF VEAFDKVVRA SERFGFEEIN IGGGWGINYS GEELDLSSYR EKVVPALKRF KRVIVEIGRY IVAPSGYLLL RVVLVKKRSN KTFVVVDGGM NTLIRPALYS AYHRVFVLGK QGKEVRADVV GPLCESGDVI AYDRELPEVE PGDIIVVENA GAYGYTMSNN YNSTVRPAEV LVGEGGEISL IRRRETEMDI FKDVVM
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