| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1273 |
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| Symbol | |
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| ID | 5170658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1285289 |
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| End bp | 1285990 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563798 |
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| Product | tetrahydrodipicolinate succinyltransferase domain-containing protein |
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| Protein accession | YP_001244863 |
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| Protein GI | 148270403 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
[TIGR03532] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000226984 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACGCAA GAGAAATCAT AGAAATGATA GCCAAAGCCA AAAAGAAAAC TCCCATAGTC
GCTTACATAA AAGGTGATTT GGCGGGCATA GATTTCTCCA GTTTCAAATT CTTCGGTGAT
GAAAAGTTCG GAATTCTCTT TGGAGAGTAC GAAGATTTCA AAAAGCTTCT CGAAGAGCAC
AAGGAAAAAA TAGAAGACTA CCATCTCGAG GTGAAAGCGA GAAACTCCGC GCTCCCTCTG
GCAGACATCA CGAAATACAA AGCAAGAATA GAACCGGGAG CGATCATAAG GGACATGGTG
GAAATAGGGG AAGGCGCTGT GATCATGATG GGAGCTGTCA TAAACGTTGG TGCAGTGATC
GGTGAAGGAA CGATGATAGA CATGAACGCG GTCATTGGTG GAAGGGCGAT CATAGGAAAG
AAGTGCCACA TAGGTGCCGG TGCGGTGATA GCGGGTGTTA TAGAGCCTCC GAGTGCAAAA
CCCGTTGTCA TAGAGGACGA AGTGGTCGTG GGAGCGAACG CTGTAATCCT TGAAGGTGTG
ACGGTCGGAA AAGGTGCGGT TGTCGCGGCC GGTGCGGTTG TAACGAAGGA TGTTCCTCCC
TACACGGTCG TGGCTGGTGT TCCCGCGCGT GTGATAAAAC AAATAGACGA AAGAACAAAA
GAGAAGACAA AGATAGTTGA TGAACTCAGA AATCTCGAAT GA
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| Protein sequence | MDAREIIEMI AKAKKKTPIV AYIKGDLAGI DFSSFKFFGD EKFGILFGEY EDFKKLLEEH
KEKIEDYHLE VKARNSALPL ADITKYKARI EPGAIIRDMV EIGEGAVIMM GAVINVGAVI
GEGTMIDMNA VIGGRAIIGK KCHIGAGAVI AGVIEPPSAK PVVIEDEVVV GANAVILEGV
TVGKGAVVAA GAVVTKDVPP YTVVAGVPAR VIKQIDERTK EKTKIVDELR NLE
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