Gene Tpet_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1269 
Symbol 
ID5170848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp1282079 
End bp1283056 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content47% 
IMG OID640563794 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001244859 
Protein GI148270399 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0000974107 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTAG GAGTTGTTGG TGCCACGGGA GAAGTTGGAA GAACGATGGT AAAAGTACTC 
GAAGAATTCA ACGTTCCCGT CACGGAGCTC AGGCTCTTCG CTTCGGAAAG ATCTGTGGGT 
AAAGAAATTG AATTCAAAGG TGAGAAATTC AAGGTCGAGC TTCTCACGGA AGAATCGATG 
AAATGGAAGT GTGACTACTT CCTGTTTTCC GCGGGTGCCA GTGTTTCCAG AAAGTTCGCT 
CCTATCGCAG CCGAAAACGG AGTGACCGTG ATAGATAACT CTTCTGCTTT CAGAATGGAG 
AAGGAAATAC CCCTTGTGGT TCCGGAGGTG AACGCTTACC TTCTCAAGGG ATACACAGGA 
ATAATAGCAA ATCCGAACTG TTCAACGATT CAGATGATCC TTTCCATCTA CAAACTTCAC 
GAAGTTTACG GAATAGAAGA GATCTTTGTG TCGACGTATC AGTCCGTCTC CGGCGCTGGT 
CATAAGGGGA TAGAAGAACT CCTTGCTCAA GAAAGAGGAG AAAACGTGAT GAAAGTCTTC 
CCAAAACCCA TTCACAGAAA CGTCATTCCT CTCATAGGTG ATATCCAGGA AAATCTTTTC 
TCTCAGGAAG AGATGAAGAT GGTGAATGAA ACAAGAAAAA TTCTGAACGA CTACTCGATA 
AGGGTGTATC CAACAACGGT GAGGGTGCCC GTTCTGTACG GACACTCTGA AGCGATCATG 
GTGAGGCTCA AGAAACCCTA CGAGTCTCTC GAAAAGGTGA GAGAAGTCAT AGCTTCTGGA 
GAAGACGTGG TGGTGACGGA CGATCTCATA ACACCGGTGG ATGTCGCAGG AAAGAACGAA 
ACTTATGTTT GCCGACTCAG AGCGACCGAT GAAAGATCCA TTCTTTTCTG GAACGTGGCG 
GACAACATCC GTGTAGGGGC TGCGACCAAC GCCGTCAGAA TTCTCCTGAA GCACGCTGAG 
ATGAACGGAA AGGTGTGA
 
Protein sequence
MKVGVVGATG EVGRTMVKVL EEFNVPVTEL RLFASERSVG KEIEFKGEKF KVELLTEESM 
KWKCDYFLFS AGASVSRKFA PIAAENGVTV IDNSSAFRME KEIPLVVPEV NAYLLKGYTG 
IIANPNCSTI QMILSIYKLH EVYGIEEIFV STYQSVSGAG HKGIEELLAQ ERGENVMKVF 
PKPIHRNVIP LIGDIQENLF SQEEMKMVNE TRKILNDYSI RVYPTTVRVP VLYGHSEAIM 
VRLKKPYESL EKVREVIASG EDVVVTDDLI TPVDVAGKNE TYVCRLRATD ERSILFWNVA 
DNIRVGAATN AVRILLKHAE MNGKV