Gene Tpet_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1265 
Symbol 
ID5170718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1278284 
End bp1278706 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content41% 
IMG OID640563790 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001244855 
Protein GI148270395 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0445299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGAA AGTGTCAAAA ACACGTGAGA TACGCTCTTA GACTTCTCGT GAGATTGTCG 
CTGGAGAACA GACCTATGTC TTCTTCGGAA CTCGCTGAGA AAGAACTCAT CACCAGAAAT
TTCACTCTGA AAGTACTTCA TTATCTTAAA AGATCGGGCC TTGTGAATTC GATCAAAGGA
AAAAACGGTG GTTTTGTTCT TGCAAAGTCG CCAGACGAAA TATCGTTTCT GGATGTTATC
AGCGTCTTTG AAAAAGACCT TGTTATTGTG GACTGCAACA GCCGGTGCAA GAATTACAGG
GCCTGCAGGG TAAAATACTT CTGGAACTGG CTTTCCGATT ATTTGAAAGA TCTGTTTTCT
AACATCACCA TCAAAGATAT CGCCTCAGGT ACTTTCACGT TTCATCTCGA GAAGCTTTCT
TAG
 
Protein sequence
MFGKCQKHVR YALRLLVRLS LENRPMSSSE LAEKELITRN FTLKVLHYLK RSGLVNSIKG 
KNGGFVLAKS PDEISFLDVI SVFEKDLVIV DCNSRCKNYR ACRVKYFWNW LSDYLKDLFS
NITIKDIASG TFTFHLEKLS