Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1265 |
Symbol | |
ID | 5170718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1278284 |
End bp | 1278706 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640563790 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_001244855 |
Protein GI | 148270395 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0445299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGGAA AGTGTCAAAA ACACGTGAGA TACGCTCTTA GACTTCTCGT GAGATTGTCG CTGGAGAACA GACCTATGTC TTCTTCGGAA CTCGCTGAGA AAGAACTCAT CACCAGAAAT TTCACTCTGA AAGTACTTCA TTATCTTAAA AGATCGGGCC TTGTGAATTC GATCAAAGGA AAAAACGGTG GTTTTGTTCT TGCAAAGTCG CCAGACGAAA TATCGTTTCT GGATGTTATC AGCGTCTTTG AAAAAGACCT TGTTATTGTG GACTGCAACA GCCGGTGCAA GAATTACAGG GCCTGCAGGG TAAAATACTT CTGGAACTGG CTTTCCGATT ATTTGAAAGA TCTGTTTTCT AACATCACCA TCAAAGATAT CGCCTCAGGT ACTTTCACGT TTCATCTCGA GAAGCTTTCT TAG
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Protein sequence | MFGKCQKHVR YALRLLVRLS LENRPMSSSE LAEKELITRN FTLKVLHYLK RSGLVNSIKG KNGGFVLAKS PDEISFLDVI SVFEKDLVIV DCNSRCKNYR ACRVKYFWNW LSDYLKDLFS NITIKDIASG TFTFHLEKLS
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