Gene Tpet_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1260 
Symbol 
ID5171473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1273480 
End bp1274796 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content46% 
IMG OID640563785 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001244850 
Protein GI148270390 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAG AATTCGACGT TGTCGTCGTT GGTGCTGGCC CTTCTGGTCT GTCCTGCGCA 
TACGTTCTTG CCAAGAATGG TCTCAAAGTT GCGGTCGTGG AGAAAGGAGA ATATCCGGGT
TCCAAAAACG TGATGGGAGG GGTTCTCTAC GTACATCCTC TGAAAGAGAT CATGCCAGAT
TTTCTGGAAA AAGCGGCAAA TTCGAAAGCT CTTGAAAGAA ACGTTATAGA GCAGAACCTT
TGGCTCCTCG GAAATGAAGG TGTCATCAAG ATCGGTCACA GAAACGTGGA ATGGAAAGAA
AATCCGAATG CATTCACTGT TTTGAGGGCA AACTTTGACA GATGGTTTGC CCAGGAGGTG
GAAAAAGCAG GTGCCCTGAT CATACCAAAA ACCAAGGTGG AAGACTTCCT GAGGAACGAA
AAAGGAGAAA TAGCAGGCGT GGTGACCTCG AGACCAAAGG GAGAAATACA CAGCAAGGCG
GTTGTGATCG CGGAGGGTGT GAATCCCATC CTCACGATGA AAGCTGGGCT CAGGAAGGAA
GATCTGAAAC CACACATGGT GGCCGTTGCT GTGAAAGAGG TGATCAGTGT TCCTGAAGAT
GTGGTGAACA GGGTCTTCGG TGTGGAGGGA AACGATGGAG CAACGATAGA ACTTCTTGGA
AGCTGGTCTG AAGGTATGTT CGGAATGGGA TTTCTTTACG CCAACAGATC TTCCGTATCT
CTGGGTTGTG GGGTTCTCCT TGAAGATCTC AGAAAAAAGA AGATCAAGCC GTATCAACTT
CTTGAGAATT TGAAAAATCA CCCTGTCATT TCCGATATGC TGGGAGAATA CAGAAACAAC
ACGATGGAGT ATCTGGCACA TTTGATACCT GAAGGTGGAT ACTACGCGAT GCCGAAGGTC
TATGGAGACA GGGTTCTGGT CTGTGGAGAT GCGGCAATGC TTGTGAACTC TATACATAGA
GAAGGATCGA ATCACGCGAT CACATCGGGA AGACTCGCTG CTGAAACACT TCTCGAAGCT
TTTGAAAAGG GAGATTTTTC TGAAAAAATT CTGAAAAATT ACTACCTCAG ATTGAAAGAA
TCCTTCATAT TGAAAGACCT GGAAAAGTAC AAAGATCTCA TGCCCACTAT GGAAAAGAAC
CACCAGTTCG TGGAAATCTA TCCGGATCTT GCAAACGATG CTTTGAAGAG ATTTCTGCAG
GTTGACGGGA CTCCAAAGTG GGACGTTCAA AAACAGATCG CGGACATGGT ACTTTCCAGG
AGAAGTTTGA TTGGAATCTC CCTTGATCTG CTCAGATTCT GGAGAGCTGT GAGGTGA
 
Protein sequence
MKIEFDVVVV GAGPSGLSCA YVLAKNGLKV AVVEKGEYPG SKNVMGGVLY VHPLKEIMPD 
FLEKAANSKA LERNVIEQNL WLLGNEGVIK IGHRNVEWKE NPNAFTVLRA NFDRWFAQEV
EKAGALIIPK TKVEDFLRNE KGEIAGVVTS RPKGEIHSKA VVIAEGVNPI LTMKAGLRKE
DLKPHMVAVA VKEVISVPED VVNRVFGVEG NDGATIELLG SWSEGMFGMG FLYANRSSVS
LGCGVLLEDL RKKKIKPYQL LENLKNHPVI SDMLGEYRNN TMEYLAHLIP EGGYYAMPKV
YGDRVLVCGD AAMLVNSIHR EGSNHAITSG RLAAETLLEA FEKGDFSEKI LKNYYLRLKE
SFILKDLEKY KDLMPTMEKN HQFVEIYPDL ANDALKRFLQ VDGTPKWDVQ KQIADMVLSR
RSLIGISLDL LRFWRAVR