Gene Tpet_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1250 
Symbol 
ID5170866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1266477 
End bp1267262 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content51% 
IMG OID640563775 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_001244840 
Protein GI148270380 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB
[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.322424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATAT CGCTTTACTC TGCGGCAACG GGGATGTCAG CACAGCAGTT CAAACTCGAT 
ACCATAGCGA ACAACCTCGC CAATGTGGAC ACAACAGGCT ACAAAAAAGT GAGGGCAGAG
TTCCAGGACC TTCTCTATCA GTACGTGAAG AACGCTGGAA CTCCAACCGC CGCGACGTCA
TCTCTTCCAA CAGGACTCTA CGTGGGTCAC GGGGTGAGAA CGGCAGCGAC GACGCGCATT
TTCACCTTGG GTAATTTCGA GCAAACGGGA AACGCGCTTG ATCTTGCGAT AGCCGGAGAC
GGATTTTTCC AGATCCAGCT TCAGGACGGT AGAATCGCTT ATACAAGAGA CGGAAGCTTC
AAGATGGACA GTGAAGGAAG AATAGTCACT TCCAACGGAC TTCTTCTGGT ACCGGAAATC
ACCATACCTG AAAACGCCGT CTCGATAAAC GTTTCTCCCG ATGGAATCGT CTCCGCCGAA
CTCCAGGATG GTACGATACA GGAACTTGGA ACGATCACCC TTGTGAGATT CGTGAACCCA
TCTGGTTTGA AATCCATAGG AGACAACCTC TATATCGCAA CTCCAGCCTC TGGAGACCCC
ATCGAGGGTG TTCCAGGACA GGACGGCTTC GGTGCTATAA AGCAGGGCTT TCTGGAGAAG
TCCAACGTTG ATGTGGTGCG GGAAATGGTG GACATGATCA CAGCACAGAG GGCCTACGAA
TTCAATTCTC GAGTTATCCA GACAGCCGAT GAGATGCTCA GAACAGCCAC GAATGTGAAG
AGATGA
 
Protein sequence
MMISLYSAAT GMSAQQFKLD TIANNLANVD TTGYKKVRAE FQDLLYQYVK NAGTPTAATS 
SLPTGLYVGH GVRTAATTRI FTLGNFEQTG NALDLAIAGD GFFQIQLQDG RIAYTRDGSF
KMDSEGRIVT SNGLLLVPEI TIPENAVSIN VSPDGIVSAE LQDGTIQELG TITLVRFVNP
SGLKSIGDNL YIATPASGDP IEGVPGQDGF GAIKQGFLEK SNVDVVREMV DMITAQRAYE
FNSRVIQTAD EMLRTATNVK R