| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1241 |
|---|
| Symbol | |
|---|
| ID | 5170347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1255534 |
|---|
| End bp | 1256058 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640563765 |
|---|
| Product | AMMECR1 domain-containing protein |
|---|
| Protein accession | YP_001244831 |
|---|
| Protein GI | 148270371 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2078] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00296] uncharacterized protein, PH0010 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGGCG AGCATCCTTA CGTGAAATGG GCAATAAGGG TCATAGAGAA TTACGTGAGA
TATGGAAAAG TGATCGAACC CGATGAAAGT GTTCCTGAAG AGCTCTTCAA AAGAAGAGCA
GGGGCTTTTG TGACTCTTCA CAAAACGGAC GGTTCTCTGA GGGGCTGTAT AGGAACCTAT
CTTCCCACAA AGCCGAATCT CGCTCTTGAG ATAAGAGATA ACGCCATCGC GGCTGCCACT
CAGGACCCAA GGTTTCCTCC GGTCTCGCCC GATGAACTCG ACGATATCGT TGTGCACGTG
GACATTCTCA GTCCTCCTGA ACCGGTGAGG GATATCTCCG AGCTCGACCC GAAAAAATAC
GGTGTGATAG TAGTTAAGGG CTGGAGGAGA GGGCTCCTTC TTCCTGACAT AGAAGGTGTG
GATACGGTCG AAGAACAGCT CAGAATAGCG AAGCTGAAAG CCGGAATCCC TGAGTGGGAC
GACGATGTGG AGATTTACAG GTTCACAGTT GAACGCTACA AATGA
|
|---|
| Protein sequence | MIGEHPYVKW AIRVIENYVR YGKVIEPDES VPEELFKRRA GAFVTLHKTD GSLRGCIGTY
LPTKPNLALE IRDNAIAAAT QDPRFPPVSP DELDDIVVHV DILSPPEPVR DISELDPKKY
GVIVVKGWRR GLLLPDIEGV DTVEEQLRIA KLKAGIPEWD DDVEIYRFTV ERYK
|
|---|
| |