| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1239 |
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| Symbol | |
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| ID | 5170821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1253510 |
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| End bp | 1254559 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563763 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001244829 |
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| Protein GI | 148270369 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCCGT CAGATAGCAA CGATCATCGG GTAACCAGAA GAAACGTCAT CATCTTTTCT
TCACTTCTTC TAGGTTCTCT TGCGATTCTC TTGGCTTTAC TCCTCATCCG AACGAAAGAT
CAGTATTATG AGCTCAGAGA TTTCGCTCTC GGAACGAGTG TGAGGATAGT CGTTTCCTCT
CAGAAGATAA ATCCCAGAAC GATCGCAGAA GCCATTCTGG AAGACATGAA GAGGATTACC
TACAAGTTTT CTTTCACGGA TGAAAGAAGT GTTGTGAAAA AGATAAACGA TCATCCCAAC
GAATGGGTCG AGGTGGACGA AGAGACTTAC AGTTTGATCA AAGCGGCCTG CGCGTTCGCA
GAGCTCACAG ATGGAGCGTT TGATCCGACA GTAGGAAGGC TTCTCGAACT CTGGGGGTTT
ACCGGAAACT ACGAAAATCT CAGGGTACCT TCTCGAGAAG AGATCGAAGA AGCTCTGAAG
CATATCGGAT ATAAAAACGT TCTCTTCGAC GATAAGAACA TGAGAGTGAT GGTTAAAAAC
GGTGTGAAGA TCGATCTTGG TGGTATAGCG AAAGGGTACG CCCTTGACAG AACTAGGCAG
ATAGCACTCT CTTTTGACGA GAACGCAACG GGGTTTGTCG AAGCAGGTGG GGATATTCGT
ATCATCGGGC CAAAATTTGG AAAGTATCCG TGGGTGATAG GAGTAAAAGA TCCCAGGGAA
GACAACGTGA TAGATTACAT CTATCTGAAA TCCGGAGCGG TTGCGACTTC CGGTGATTAC
GAAAGATATT TCGTTGTGGA CGGTGTCAGG TATCATCATA TTCTCGATCC TTCAACGGGG
TATCCTGCTC GTGGTGTGTG GAGCGTAACG ATCGTAGCCG AAGATGCCAC CACAGCCGAC
GCACTCTCCA CAGCGGGCTT TGTGATGGCC GGAAAAGACT GGAGGAAGGT GGTGCTCGAT
TTTCCAAATA TGGGAGCTCA TCCGCTGATA GTTCTTGAAG GAGGAACGAT CGAAAAGTCT
GAGACCTTCA AGCTGTTCGA AAGAGAGTGA
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| Protein sequence | MWPSDSNDHR VTRRNVIIFS SLLLGSLAIL LALLLIRTKD QYYELRDFAL GTSVRIVVSS
QKINPRTIAE AILEDMKRIT YKFSFTDERS VVKKINDHPN EWVEVDEETY SLIKAACAFA
ELTDGAFDPT VGRLLELWGF TGNYENLRVP SREEIEEALK HIGYKNVLFD DKNMRVMVKN
GVKIDLGGIA KGYALDRTRQ IALSFDENAT GFVEAGGDIR IIGPKFGKYP WVIGVKDPRE
DNVIDYIYLK SGAVATSGDY ERYFVVDGVR YHHILDPSTG YPARGVWSVT IVAEDATTAD
ALSTAGFVMA GKDWRKVVLD FPNMGAHPLI VLEGGTIEKS ETFKLFERE
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