Gene Tpet_1235 details

Gene Information

• Locus tag: Tpet_1235
• Symbol: radC
• ID: 5171343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 1251479
• End bp: 1252147
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640563759
• Product: DNA repair protein RadC
• Protein accession: YP_001244825
• Protein GI: 148270365
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2003] DNA repair proteins
• TIGRFAM ID: [TIGR00608] DNA repair protein radc

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGGG ATGGTGGAAG TTTGCTTCCA AGAGAGAGGA TGATAAAGGC GGGGCCAGAG 
TCGCTTTCGG TTGAAGAACT CGTCGCCATC GTGCTGAGAA CCGGAAAGAA GGGGAAGCAC 
GTTCTCGAAC TTTCAAAGGA TCTTCTTGAA AGGTTTGACG GCTCGTTGAT AAAACTCTCG 
AACGCAGGTC TCGAAGAGAT AGCTTCGGTC GAAGGGGTCG GTATGGTCAA GGCCATCACC 
TTGAAAGCTG CTCTGGAGCT TGGAAAAAGA CTTCACAGAG AACTGGAAAG GATACCGGAG 
AAGCTGGACT CTTCCGTGAA AGTTTACAGG TACTGCCAGG AAATGGTGTA TCTTGAGAGG 
GAAATTGTGA AGGTGATCTG TCTCGATACG AAGCTCAACG TTATAGGAGA AAACACACTC 
ACTGTTGGAA CTTCTGACAG GAGTTTGATA CATCCGCGGG ACGTGTTTCG GACGGCTATC 
AGGGCTAATG CATCTGGAGT GATCGTCGTT CACAACCATC CTTCTGGTGA TCCCACTCCC 
AGCAAAGAAG ATCGTTTGAT CACGGAAAGA TTGAAACAAG CGGGAGAAAT CCTTGGGGTG 
AGTCTTGTGG ATCACGTCAT TGTATCGAGA CGAGGATATT TCAGCTTCAG GGAGGAGGGA 
GAACTTTGA 

 

Protein sequence

MKRDGGSLLP RERMIKAGPE SLSVEELVAI VLRTGKKGKH VLELSKDLLE RFDGSLIKLS 
NAGLEEIASV EGVGMVKAIT LKAALELGKR LHRELERIPE KLDSSVKVYR YCQEMVYLER 
EIVKVICLDT KLNVIGENTL TVGTSDRSLI HPRDVFRTAI RANASGVIVV HNHPSGDPTP 
SKEDRLITER LKQAGEILGV SLVDHVIVSR RGYFSFREEG EL