Gene Tpet_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1234 
Symbol 
ID5169954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1250934 
End bp1251461 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID640563758 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001244824 
Protein GI148270364 
COG category[R] General function prediction only 
COG ID[COG2316] Predicted hydrolase (HD superfamily) 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTGT TGAAAACCCA CGTTAAAACG AAAAATCTTG TGAAGCACTG TCTTGCAGCG 
GAAGCTGTTA TGAGAGCTCT TGCGAGGGAA TTCAACGAGG ACGAAGAAAA ATGGGGTCTT
GCCGGACTTC TTCACGATCT GGATTACGAC TACACCAAAG ATAAACCCGA GGAACATGGC
TTGAAGACCC TGGAAATCCT GAAAAATGAG GACGTACCCG AAGACGTTCT CAACGCTATT
CTGGCCCACT GTGAAAAGAA AACTCCAGAA ACTTTGATGG AGAAGGCTTT GTATGCGGTG
GATCCAACCA CTGGTTTTAT AGTAGCGGCC GCACTGATCA GACCAGAGAA GAAACTGGAT
GTTATCGATG TGGATTTTCT GCTGAGGAGA TTCAAGGAAA AGGCCTTTGC GAAGGGAGCG
AGCAGGGAAC AGATGAAAAC CTGCGAAAAC TTTGGGCTCT CGCTTGAGAA ATTCTTAGAA
ATTTCTCTCG AGGCGATGAA AACGATCGCT TCTGAACTCG GTTTGTGA
 
Protein sequence
MELLKTHVKT KNLVKHCLAA EAVMRALARE FNEDEEKWGL AGLLHDLDYD YTKDKPEEHG 
LKTLEILKNE DVPEDVLNAI LAHCEKKTPE TLMEKALYAV DPTTGFIVAA ALIRPEKKLD
VIDVDFLLRR FKEKAFAKGA SREQMKTCEN FGLSLEKFLE ISLEAMKTIA SELGL