| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1217 |
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| Symbol | |
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| ID | 5170251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1237609 |
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| End bp | 1238925 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563741 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001244807 |
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| Protein GI | 148270347 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00113617 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTCTTG CTTTCAATTA CAGGATTGAG GAAAACGGAG TGCTTTACTT CCTCGGTGAT
GCGACGCCAA CGTCGTATGA GATGGAGATC ATCGAGGAAT GGAAACGCCT TCCTGTGGTG
ACCCTTGTTT ACGATGGCCC CTCTGAGTAC GAAGGCGCTG TGAGAGATTT TCTTTCCGAA
GAAGGAGTAC TGACTGGTTC GGGAACACCC CTCATTGTCA AGATTCGAAC TAAGGAAAAT
TACGTTGCCT TTCAGTTGAT ATTCGAAGAA AAGTCCGTGG ATAACTTTGA AAATCTCTCA
ACAAAAGACA CCTTCCCGGA ACACTTCAGA AAAGCTATTA GGGAAATCTT TCCAGACTCT
CAGCTTCCCG ATGAGTTTTT CCTTATCGTT TACAGAGATG GAAAGTTTGA AAGGAGCCTT
CAACCGACTT CGACTTTTCC GGGAAGAAAA GCTCCCGTGG TGATAATTCC TCAGTGGAAA
GAGAAACATA CTCTGGAAAT AGGAAGTTAC AGAAAGGTGG TTGACGAAGG GTTTTACCAG
ATCGGTGGGA AGATGATATA CGCAGGAAGG GATATTTTCA TAGAAGACGT CCCGGGGCTC
TACAGAAACA TCGATATGGT CTTTTTGGAC GGAGAAAAAG AATACATCTA TCGCGAAGGA
TTTCTTATGA TGGGAGAAAA AACTCTAAAG GTCGAAGAGC CTGTTGATGT GGTTGATGGA
ATAGTGATTA CCAGTCACAG GATGGGAAGT AAAGAGATCG ATGATACAAT TCTGTTCAGG
TGGGACAATT TTGTTTTAAC GGCATCGGGG TCCCTTGTGG ATATAAGAGG AAAATGGTCG
TGGAAAGTTT CAAATACACC GGTAGAGTTT TCCTTTCAGG GTGATGTTTT CTACGTACTC
GATGTGTGCG GTTTCTTGAG AAGTTACAAT CTCAAAACAA GACGGCTTCT CTGGGAGAAG
AAATTCGAAG GAGCCTGGGG ACTGGATTCT TCTAAGGATC GGGTTTTCCT GGGTGCTGGA
GACGAAGTAC TCGTTTTGAA CGCGCAGGAC GGAGAAACGA TCGAAAGAAT GGTAGCAGAT
GATTTCGCGG TATGGAAAGG GGAATTGCTC GTTTACAAAG ATGGAAAGGT AGATGGGGAG
GATATGGAAG GGTTCTTCAT CAGAAACTTT GGGATGCCTC TCTTTGTTTC GGGAAAGCGA
GTTGTGATAT TTGGTACGGA AAAAAAGGAG TTCGAAGAAG TTGAGAAAGT ACGTCTTTTT
GAGTGGGGAA CTGTGATAAA GGTGGGAAAT GAAGTATGGC TGATAAGAAG AGATTAG
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| Protein sequence | MILAFNYRIE ENGVLYFLGD ATPTSYEMEI IEEWKRLPVV TLVYDGPSEY EGAVRDFLSE
EGVLTGSGTP LIVKIRTKEN YVAFQLIFEE KSVDNFENLS TKDTFPEHFR KAIREIFPDS
QLPDEFFLIV YRDGKFERSL QPTSTFPGRK APVVIIPQWK EKHTLEIGSY RKVVDEGFYQ
IGGKMIYAGR DIFIEDVPGL YRNIDMVFLD GEKEYIYREG FLMMGEKTLK VEEPVDVVDG
IVITSHRMGS KEIDDTILFR WDNFVLTASG SLVDIRGKWS WKVSNTPVEF SFQGDVFYVL
DVCGFLRSYN LKTRRLLWEK KFEGAWGLDS SKDRVFLGAG DEVLVLNAQD GETIERMVAD
DFAVWKGELL VYKDGKVDGE DMEGFFIRNF GMPLFVSGKR VVIFGTEKKE FEEVEKVRLF
EWGTVIKVGN EVWLIRRD
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