| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1214 |
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| Symbol | secA |
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| ID | 5171451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1232987 |
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| End bp | 1235602 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563738 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001244804 |
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| Protein GI | 148270344 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000480114 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACTCT TCGATAAGAA CAAGCGCATT TTGAAAAAAT ACGCGAAGAT GGTCTCAAAA
ATAAACCAAA TAGAGTCCGA TCTACGCTCG AAGAAAAACA GCGAGCTGAT AAGACTTTCC
ATGGTGCTGA AGGAAAAAGT GAATTCCTTT GAGGACGCCG ATGAACACCT TTTTGAAGCG
TTCGCCCTGG TTAGAGAAGC AGCACGAAGA ACGCTCGGAA TGAGGCCTTT CGATGTCCAG
GTGATGGGTG GTATAGCGCT CCATGAAGGA AAAGTGGCCG AGATGAAGAC CGGTGAAGGA
AAAACCCTCG CCGCCACCAT GCCGATTTAT CTGAACGCTC TCATCGGAAA GGGTGTTCAT
CTGGTCACGG TCAACGACTA TCTGGCCAGA AGAGATGCGC TCTGGATGGG ACCCGTGTAT
CTCTTTCTCG GTTTGAGAGT GGGTGTGATA AATTCTCTGG GAAAGTCGTA CGAGGTGGTG
TGGAAAAACC CTGATCTCGC CAGAAAAGCA ATAGAGGAAA ACTGGAGTGT CTGGCCTGAT
GGGTTCAACG GAGAAGTTTT GAAAGAGGAA TCTATGAACA AAGAAGCCGT TGAGGCTTTC
CAGGTGGAAC TCAAAGAGAT AACCAGGAAG GAAGCCTATC TGTGTGACGT TACCTACGGC
ACGAACAACG AATTCGGCTT CGATTACCTG AGGGATAACC TCGTTCTCGA TTACAACGAT
AAGGTGCAGA GAGGCCACTT CTACGCCATT GTGGACGAAG CCGACAGCGT ACTCATAGAC
GAAGCAAGGA CCCCACTGAT CATCTCCGGT CCCTCCAAAG AGAGTCCTTC TGTGTACAGG
AGATTCGCTC AGATCGCTAA GAAGTTTGTT AAAGATAAGG ACTTCACGGT AGATGAAAAA
GCGAGGACCA TCATTCTCAC CGAAGAGGGT GTGGCGAAAG CGGAGAAGAT CATCGGTGTC
GAAAACCTTT ACGATCCGGG AAACGTGTCT CTTCTCTACC ATCTTATAAA TGCCTTGAAA
GCGCTGCACC TGTTCAAGAA GGATGTCGAT TACGTCGTCA TGAACGGTGA AGTTATTATC
GTTGACGAGT TCACGGGAAG ACTGCTGCCT GGCAGACGCT ACAGTGGAGG GCTCCACCAG
GCTATCGAAG CCAAAGAAGG AGTACCCATA AAGGAAGAAT CCATCACCTA CGCGACGATT
ACCTTTCAGA ATTACTTCAG AATGTACGAA AAGCTCGCCG GTATGACGGG AACAGCCAAA
ACAGAGGAAA GCGAATTCGT ACAGGTTTAC GGTATGGAAG TGGTGGTTAT TCCCACTCAC
AAGCCCATGA TAAGAAAGGA CCACGATGAT CTGGTCTTCA GGACTCAGAA AGAAAAGTAC
GAAAAGATCG TGGAAGAAAT CGAAAAGCGC TATAAAAAAG GTCAGCCAGT TCTTGTCGGA
ACAACCTCCA TCGAAAAGAG CGAACTTCTC AGTTCCATGC TGAAAAAGAA AGGTATCCCC
CATCAAGTTT TGAACGCGAA ATACCATGAA AAAGAAGCTG AGATCGTCGC CAAAGCCGGG
CAAAAAGGCA TGGTGACGAT CGCCACCAAC ATGGCTGGGA GAGGAACAGA TATAAAACTC
GGACCAGGAG TGGCGGAACT TGGAGGACTG TGCATCATAG GAACGGAAAG ACACGAGAGC
AGAAGAATCG ATAATCAGCT GAGAGGACGT GCCGGTAGGC AAGGAGATCC GGGAGAGTCC
ATCTTCTTCC TCTCTCTCGA AGACGATCTT CTGAGAATCT TCGGTAGTGA ACAGATTGGA
AAAGTGATGA ACATACTCAA AATAGAGGAA GGACAGCCTA TACAGCATCC GATGCTTTCA
AAGCTCATCG AAAACATTCA GAAGAAGGTT GAGGGTATCA ACTTCTCGAT AAGAAAAACC
TTGATGGAAA TGGATGATGT CCTCGACAAA CAAAGAAGAG CAGTGTACTC GCTTCGCGAT
CAGATCCTTC TCGAAAAAGA CTACGACGAA TATCTGAAGG ATATCTTCGA AGATGTTGTC
AGCACAAGGG TTGAGGAGTT CTGTTCCGGG AAAAATTGGG ATATCGAAAG CCTCAAGAAT
TCTCTTTCTT TCTTCCCGGC TGGTTTGTTC GACCTGGACG AAAAGCAATT CAGTTCTTCT
GAAGAACTTC ACGATTACCT GTTCAACAGA CTTTGGGAGG AATATCAGAG AAAGAAGCAG
GAAATAGGCG AGGATTACAG GAAAGTGATC AGATTCCTGA TGCTCAGAAT AATAGACGAT
CACTGGAGAA GATACCTGGA AGAGGTAGAG CACGTTAAGG AAGCCGTTCA GCTGAGGTCT
TACGGTCAGA AAGATCCTAT CGTTGAATTC AAAAAGGAAA CGTACTACAT GTTCGATGAA
ATGATGAGGA GAATAAACGA TACGATAGCC AACTACGTCC TCAGAGTTGT TAAAGTCTCG
GAAAAGGATG AAAAAGAGGC CAAAGAAGAA CTTGGTAAAA TAAGACTCGT GCATGAAGAA
TTCAATCTTG TGAACAGAGC GATGAGAAGA GCCACAGAAA AGAAAAAGAA AAAAGATGGA
CTGCACAGCT TTGGTAGAAT AAGAGTGAAG AGGTGA
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| Protein sequence | MILFDKNKRI LKKYAKMVSK INQIESDLRS KKNSELIRLS MVLKEKVNSF EDADEHLFEA
FALVREAARR TLGMRPFDVQ VMGGIALHEG KVAEMKTGEG KTLAATMPIY LNALIGKGVH
LVTVNDYLAR RDALWMGPVY LFLGLRVGVI NSLGKSYEVV WKNPDLARKA IEENWSVWPD
GFNGEVLKEE SMNKEAVEAF QVELKEITRK EAYLCDVTYG TNNEFGFDYL RDNLVLDYND
KVQRGHFYAI VDEADSVLID EARTPLIISG PSKESPSVYR RFAQIAKKFV KDKDFTVDEK
ARTIILTEEG VAKAEKIIGV ENLYDPGNVS LLYHLINALK ALHLFKKDVD YVVMNGEVII
VDEFTGRLLP GRRYSGGLHQ AIEAKEGVPI KEESITYATI TFQNYFRMYE KLAGMTGTAK
TEESEFVQVY GMEVVVIPTH KPMIRKDHDD LVFRTQKEKY EKIVEEIEKR YKKGQPVLVG
TTSIEKSELL SSMLKKKGIP HQVLNAKYHE KEAEIVAKAG QKGMVTIATN MAGRGTDIKL
GPGVAELGGL CIIGTERHES RRIDNQLRGR AGRQGDPGES IFFLSLEDDL LRIFGSEQIG
KVMNILKIEE GQPIQHPMLS KLIENIQKKV EGINFSIRKT LMEMDDVLDK QRRAVYSLRD
QILLEKDYDE YLKDIFEDVV STRVEEFCSG KNWDIESLKN SLSFFPAGLF DLDEKQFSSS
EELHDYLFNR LWEEYQRKKQ EIGEDYRKVI RFLMLRIIDD HWRRYLEEVE HVKEAVQLRS
YGQKDPIVEF KKETYYMFDE MMRRINDTIA NYVLRVVKVS EKDEKEAKEE LGKIRLVHEE
FNLVNRAMRR ATEKKKKKDG LHSFGRIRVK R
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