| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1201 |
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| Symbol | rplT |
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| ID | 5171050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1222667 |
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| End bp | 1223023 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563720 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001244791 |
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| Protein GI | 148270331 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000130476 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAGTAA AAAGAGCTGT GCACGCAAAG AAGAAGAGAA AGAAATATTT GAAAGCCGCT
AAGGGATACA GAGGTGCTCT CAGCAGAAGG TACAAGCTCG CCAAGCAGAT GTATGTAAGA
TCGAAATGGT ACTCCTATGT TGGAAGAAAG CTGAAGAAAA GAGATATGAG AAAACTCTGG
ATCACAAGAA TCAACATTGC TGCGAGAAAC GAAGGGCTCA AATACAGTGA GTTCATTCAT
GGTTTGAAAC TTGCCGGTGT CTCCATAAAC AGAAAGATGC TCTCTGAACT TGCGGTGAAC
GATCCTGAAG CTTTCAGAGA ATACGTGAAG ATAGCAAAAG AAGCTCTCGC ATCTTGA
|
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| Protein sequence | MRVKRAVHAK KKRKKYLKAA KGYRGALSRR YKLAKQMYVR SKWYSYVGRK LKKRDMRKLW
ITRINIAARN EGLKYSEFIH GLKLAGVSIN RKMLSELAVN DPEAFREYVK IAKEALAS
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