| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1199 |
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| Symbol | |
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| ID | 5170051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1221171 |
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| End bp | 1221947 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563718 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001244789 |
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| Protein GI | 148270329 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000341711 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGTTTTTT CAATTCGAAT AATCGAAAGA ACCACGAAAA AGGTGATGGA AGAATATTCA
ACATCTCCAA TAACCCCACC AATGGAAAAA GACTTCCTCG AAATTTCACC CTTCAGGACA
GTCATGTCCT TCCATCTCGA TATGAAGCAC GACATGATCG TTGGTGTCGA GACCAACCTT
GAATGTGACG AAAAGACAGC CTGGGAGCTG GTGGAAACGC TCGAACAATT TGGAAACATT
CTCACCACCA TTCTCAGAGA ACGTCTCTAC AGAGACAGAA GTATGAAGGA TCCTCTCACG
GGAGTTCTGT CCAGGTGGTA CTTCATGGAA CGTCTTGAGG AAGAGGCGTA CAAATCTTCG
AGGTATAAAT CTCCACTCTC CATCATCATG TGCGATGCCG ATGACTTCAA AAAGATAAAC
GATCAATTTG GACACGTAGC GGGCGACAAA ACTCTCAACT GGCTGGGAAG AAAGATGAGG
TCTGTTTTGA GAAAGAGTGA TCTTGTGGGA AGATACGGTG GAGAAGAGTT CATCATAGCT
CTCCCCGGAA CCTCTCTGGA AGAGGCAAAG ATCGTGGCAG AGAAATTAAG AAAGGCCGTT
ATGGAAGATC CTGAGAACAT CTACCATGTT ACTCTGAGCT TTGGGGTGGC AGAATACAAA
AACGGCGAAG ATCCTCTTGA AACAATAAAG AGGGCCGATG AGGCCCTCTA CCTGGCAAAG
ACTCTTGGCA AAAACTCTGT GGTCACAGAG AAAGTACTTT CTCGACGATC TTCTTGA
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| Protein sequence | MVFSIRIIER TTKKVMEEYS TSPITPPMEK DFLEISPFRT VMSFHLDMKH DMIVGVETNL
ECDEKTAWEL VETLEQFGNI LTTILRERLY RDRSMKDPLT GVLSRWYFME RLEEEAYKSS
RYKSPLSIIM CDADDFKKIN DQFGHVAGDK TLNWLGRKMR SVLRKSDLVG RYGGEEFIIA
LPGTSLEEAK IVAEKLRKAV MEDPENIYHV TLSFGVAEYK NGEDPLETIK RADEALYLAK
TLGKNSVVTE KVLSRRSS
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