| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1198 |
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| Symbol | |
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| ID | 5170014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1218277 |
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| End bp | 1221192 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640563717 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001244788 |
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| Protein GI | 148270328 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000411911 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAT TTCTGAGGGA AACGTACTGG GGGGATGAAT TTCTCATAGA AGATGACGGT
GAAGATCAAG TTTTGAAAAT CGTTAGAGTT CCCGTGGATA GATCTTTCTT CTTCAACGAA
TACGCGAAAT TGAAACGTTT CAAGTTACCA AATGTTCTAC TGCCTGAAAA GTTGAAAATC
TCTGAAGGAA AGTTCCTGCT GTTCTATCCC TACTACCACA ACCTTGCACC TCTCGAAAAT
TTGAGTGAAC AGGTCGCAAA GCAGCTTTTC AGGTTGTTTC GCTTCCTCTC GAGAGCGGGC
GTTACTATTC CCGCGCTCGG GATGGACGAC GTATTGGTGA ACGACGGTGT TTTTTTGATT
CCCGCGCTCA TCTCGGACCT TTCTGAGGAT GTGAAAGGCG TTGTTTTTTC GAAAAAGAAA
ACCCCCCAGG CAACTGAAGA AGTGTGCAGA CGTTTTTTGA AAATTCACGG AATAGAACCT
CATTTGGAGG ACAGAGAGTT CTCTTTTGAG TCCAAAGAAA TCAGAATTCC TTACATTCAC
AGGAAGGAAG AAATATTGAT AAAAAGAGAC ATAGAAGCCG CTCAAAAATT TCCTCTCTTC
ATTTTGATCA CAGGTGAACA GAGAGTGGGA AAGACGAAAC TCGCCTCTGT TCTCGTTGAT
GAGTTAAGAG AGGAAGGATA CCTGATTCAT CAGATTTCTT CTCTCGAAGA CCTCCGCGTA
TGGTACGACG CTTCAGATGA ACTCGATCTT CTCACAAAGT TCGATGACGG TCAAAAAAAA
GTGATTTTAA TCGACGACCT GCTCGAAGGT TCGGACTTGC TATCGTTTCT TGAGGAGTTT
TTTGGACTCA CTACCAGTAC CAGAATAATC GTTTTGACGA CTTCCACAAA GGTTTTTCGG
TTCTTTCACA GGGTGTACAG ACTCCCTCCT TTCACACTCG AAGAGACTCA GATCTTTCTC
GAGAGAGCGT TTGGAAAGAC CAGTGAAGAT CAGGTAAAAC TAATGCACAG TCTCAGTAAA
GGACTACCAG GATACATGGT GGAACTATTG AAATTCTTCA ACAAATCCAA TCTCAGAGAC
AACATTGTTG GAATCTTCAA ACCTCTTCTT CGAGAGCTGG ATTCCGTAGA AATCAGAGAA
CTGAGCGTTC TGGGACAGAA GTTCACTGGA AGTGAATTGA ATGTTCTTGA AAAGATAACA
GGAAAAGACT ACCATGATAC TTTGATGTCT GCGTACGATT CTGGTGTGAT AACGACAGAA
GAAGGGCTCT ACAGATTCAC ACTTAGAGAA TTCTGGAAAT ACTACTACAA TAAGCTTTCA
GAGATCAAAA AGAAAGAACT CCACGAAAAA CTGTTCGAAA ATCTCCCGGA CGACCTCGCA
ATAAAACACG CCCTATCTCT GGAAGATCCG AAATTAAGAT TCTTCTACGT GTTGAGATAC
GTGAGAAAAC ACTTCTGGGA TTACGAAAAA ACCAGGTCAC TCATTGAATA TCTGAAAAGA
CTGGAAGAAT CCTTCAAAAA GTCATATTAT TCCATAGAAA GCCTGAAGAT GAAGCTCGTT
TTCAGGATAG ATCCTCTGGG TACAGAAAAG GAGAACTTCC ACTTTCGAAG GTTCAAAACT
CTCGGAGAAG CAGATATCAA CTCAATCTTG CAAAAAGGCT CGCTGTCTTA TTATGATCTC
TACAATCTCG TCGTTCTTTC CCGTTCCTGC AGAAGAGCAG GAAAAAAAGT CCCCCAGGAA
ATTCTCAACA TTATCAAAAG AGAGCTCAAA GAGAAAGATT TCTCCACAAA AGAAAGGCTT
TATCTGAAAG CTCATCTTCT CTACGAGCTC TTCTCCTTGA CTGAAGATCG CGAAACATTG
AAAGATATGA TGAACATCGC TTCCTCGGAA GGTTTTCTCG ATCTTCAAGT GATGGGTTAC
AGAGCTTTGG GACTTCTTTC AAGAACGAGA GCGATGAGTA ACTACTATTT CAATCACTCA
TTAGAACTTT CAAGAAAAAT AGATCCATCG CTTTCTATTG TGGACGAAAG CAACTTGACA
TGGAGCTTGC TCTATGAGGG AAAAATAACA AACTTCTTTG TTCAGCTTGA GAGGCTTAGA
AAACAGGCAA GACTTTTTGA AAACGCACCT ATTCTTTCTT ACACCTATTT CCTCGAAGGG
CTCTACCACA TTCACAGGAA AGACTTTCAG AAAGCAGAAG AAGTTTTCAG AACAGAACTC
GAACTGGAAG AAAAACATGG AATAGAGAGA AGAGCACTCA GAGGGCTGGT CATAAATTAC
CTGTTTTCTG GAGACATTGA ATCCGCCAAA AGGCTCCTGG AAAAAGATGA GCCCGAGTTC
GATAGATTCG GATTCGACTT CTTCAAAAGG ATGGTTCTTG CAAAGGATGA TTCAGAATTC
TTGAAAATCT GGAAAGAAAG GCTTGAGACT CCCCAGAAGT TTTTCAACGA AGAAATCGCT
TACGTTTTTG CGGAAAAGTT AGCAAAACTG GATCCAGAAG GCTTCGAAGA ATTTCTCCTC
GAACTTGAAA GGGAAAATGT CGAAAACTCC TCAAATCTCA CACTTGCTCT GGTTTATGAA
ACATTTTACA AATTCTACAG TACGCTCAGA GAAACCTTCA AAGCCAAGCG TTATCTCAGA
AAGGCGATAT TCGTCTACAA CCTGATAAGT TTGAGAGAAG TATCAGTCAA ACTGGAGGCA
GAAGAAAAAA CTCAAATTGA AGGGAAAAAA CCGTCGTTTT ATCTATTGAT AGGCTTCATA
GAAACAGAAA AGGAATTTTC TGATATGATG GAGTTTGCTT CGGCAAGGCT TTCAGAGGTG
ATTCCGTACG AGGTTTTTTC AATTCGAATA ATCGAAAGAA CGAGGAGAGA CGAGAGGGGC
GAAATTCAAA ATTTTTGGTT TTTTCAATTC GAATAA
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| Protein sequence | MKKFLRETYW GDEFLIEDDG EDQVLKIVRV PVDRSFFFNE YAKLKRFKLP NVLLPEKLKI
SEGKFLLFYP YYHNLAPLEN LSEQVAKQLF RLFRFLSRAG VTIPALGMDD VLVNDGVFLI
PALISDLSED VKGVVFSKKK TPQATEEVCR RFLKIHGIEP HLEDREFSFE SKEIRIPYIH
RKEEILIKRD IEAAQKFPLF ILITGEQRVG KTKLASVLVD ELREEGYLIH QISSLEDLRV
WYDASDELDL LTKFDDGQKK VILIDDLLEG SDLLSFLEEF FGLTTSTRII VLTTSTKVFR
FFHRVYRLPP FTLEETQIFL ERAFGKTSED QVKLMHSLSK GLPGYMVELL KFFNKSNLRD
NIVGIFKPLL RELDSVEIRE LSVLGQKFTG SELNVLEKIT GKDYHDTLMS AYDSGVITTE
EGLYRFTLRE FWKYYYNKLS EIKKKELHEK LFENLPDDLA IKHALSLEDP KLRFFYVLRY
VRKHFWDYEK TRSLIEYLKR LEESFKKSYY SIESLKMKLV FRIDPLGTEK ENFHFRRFKT
LGEADINSIL QKGSLSYYDL YNLVVLSRSC RRAGKKVPQE ILNIIKRELK EKDFSTKERL
YLKAHLLYEL FSLTEDRETL KDMMNIASSE GFLDLQVMGY RALGLLSRTR AMSNYYFNHS
LELSRKIDPS LSIVDESNLT WSLLYEGKIT NFFVQLERLR KQARLFENAP ILSYTYFLEG
LYHIHRKDFQ KAEEVFRTEL ELEEKHGIER RALRGLVINY LFSGDIESAK RLLEKDEPEF
DRFGFDFFKR MVLAKDDSEF LKIWKERLET PQKFFNEEIA YVFAEKLAKL DPEGFEEFLL
ELERENVENS SNLTLALVYE TFYKFYSTLR ETFKAKRYLR KAIFVYNLIS LREVSVKLEA
EEKTQIEGKK PSFYLLIGFI ETEKEFSDMM EFASARLSEV IPYEVFSIRI IERTRRDERG
EIQNFWFFQF E
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