| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1197 |
|---|
| Symbol | |
|---|
| ID | 5170060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1217313 |
|---|
| End bp | 1218314 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640563716 |
|---|
| Product | phosphoesterase domain-containing protein |
|---|
| Protein accession | YP_001244787 |
|---|
| Protein GI | 148270327 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0618] Exopolyphosphatase-related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0177078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGAGA TCGTCAAAGT GCTTTCCCGA CACGATAAAA TACTCGTTGT AGGACACATA
ATGCCCGATG GTGATTGTGT GAGTTCCGTT CTGAGCCTCA CACTCGGACT GGAAAAATTA
GGAAAAGAAG TGAAGGCTGC TGTAGATTAC AAAATTCCTT ACGTATTCGA GAAATTCCCT
CACATAGATA AAATAGAAGA GAATCTGAAT TTTGATCCGG AACTTCTTGT GGTGGTTGAT
GTCTCTTCTC CCGACAGAAT CGGAAAGTTC CAGGATTTCC TGGATAAGGT TCCTTCTGTT
GTTATCGATC ACCATTCAAC GAACGTGAAA TTCGGAAACT GGAACTGGGT GGATCCATCC
TTTGCGGCCA CCGCTCAGAT GATATTCAGA ATCAACGAAG CACTCGGTGT AGAGTATGAT
TCGAAGCTTG CCACTCTGAA CTACCTTGGG ATCGCAACCG ACACAGGGTT CTTCAGGCAC
TCCAACGCAG ATGTCAGAGT GTTCGAAGAC GCCTACAAAC TGGTGAAGAT GGGAGCAGAT
GCCCATTTTG TTGCCAAAGA AATCCTGGAG AACAAAAGAT TCGAACAGTT TAAATTGTTC
GCTGAAGTCC TTGAAAGGCT TCAACTGCTC GAAGATGGGA AGATAGCCTA TTCTTACATT
GACTACGACA CATATCTCAA ACACAACTGC ACCGATGAGG ACAGTGCGGG ATTCGTTGGG
GAGCTTCGTT CTATAAGGGG TGTGGAAGTG GCTGTGCTCT TCATGGAGTT CCCACGTGGT
AAAATACACG TCAGCATGAG ATCAAAAGAT TGGTTCAATG TAAACGAGGT TGCCTTCGAG
CTTGGAGGAG GAGGGCACCC GCGAGCGGCG GGGGTGACCT TTGAGGGGGA GAAAATAGAA
GAAGTGATTC CTAAGGTTAT AAATCATCTC TTGAAGAAGT TCAAAGAAGG TGTGGAAAGT
GAGAGTGAAA AAATTTCTGA GGGAAACGTA CTGGGGGGAT GA
|
|---|
| Protein sequence | MDEIVKVLSR HDKILVVGHI MPDGDCVSSV LSLTLGLEKL GKEVKAAVDY KIPYVFEKFP
HIDKIEENLN FDPELLVVVD VSSPDRIGKF QDFLDKVPSV VIDHHSTNVK FGNWNWVDPS
FAATAQMIFR INEALGVEYD SKLATLNYLG IATDTGFFRH SNADVRVFED AYKLVKMGAD
AHFVAKEILE NKRFEQFKLF AEVLERLQLL EDGKIAYSYI DYDTYLKHNC TDEDSAGFVG
ELRSIRGVEV AVLFMEFPRG KIHVSMRSKD WFNVNEVAFE LGGGGHPRAA GVTFEGEKIE
EVIPKVINHL LKKFKEGVES ESEKISEGNV LGG
|
|---|
| |