Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1189 |
Symbol | |
ID | 5170890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1210218 |
End bp | 1211486 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563708 |
Product | major facilitator transporter |
Protein accession | YP_001244779 |
Protein GI | 148270319 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00252456 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAG ACGAAATAGT TGAAAAATAC GTGGACAGAA AAACTCAGAG AAGGTTTCTC ATCCTCACTT CTATCGCCTG GATGTTCGAC GCTGCCGGTG TTATGCTTCT TTCTTTTGTG CTTCCTTACG TGATAAAGGA ATGGAATCTC ACCTCTACTC AGGGAGCTAC CATAGCGAGT GCTACCTTCC TTGGAATGCT TTTTGGAGCG CTTTCTGTGG GGTTCGTGGC TGACCTTCTT GGAAGGAAAG TTTCCAATCT GTTCTTTTTC ATCGTAACGA TCACCTTCAC TTTTCTGTCC GGCTTTTCCT CATCGTTCGA AACTCTTTTA GTTCTGAGAG GCCTTTCGGG TTTTGGGTAT GGAGGCTTGA TGCCTTCGTT CAACGCGTAT CTTGCAGAAT TCACGAGTAT CAGACTCAGG GGAAGGTATC TTGTGCTTCT GGAGTCGAGC TGGGCGGTTG GGAGTATACT GATAGGACTC TTCGCAGTGA ATGTTCTCCC GAACTGGAGA TGGGTCTTCT GGATCTTCTC CATCGGGTAC CTTTTTGTTC CGGTGTTTCT TAGGATGCCC GAAACTCCAA AGTACGCGTT TTTGAAGGGT GGAAAAGAAG CGCTGGAAAG GTCTCTGGGT AAAAGAGTGG AGGAAGAGGT GGAGCTTCCA AAAAAAGAGA AAGTTCCCAT CCTGGCTCTT TTGAAGAGGG AACATTTGAA AGACACAGTT GTGATCTGGA TAGCGTGGTT CGTTGTGAGC TTCGTGTATT ACGCTCTGTT CACCTGGGCT CCCAGGATCT TCTCCTCGCT GGGTGTGAGT GTTGTCAAAT CTTCCTGGTT CACATTCTAC ATGATGGTGG CACAGCTTCC CGGGTACCTT TCGGCAGCCT ACTTCATAGA AAAATGGGGA AGAAAGGCTT CTCTTGGTGT TTACTTCATA GGAACAGGAC TTGTCGCTCT GCTGTGGGCC AACGTGAGAG GAGATGCTTC GCTTCTTGCA GCTGCTTTGG TCCTTTCTTT CTTCTGTCTT GGAGTGTGGG GACTGGTCTA TGCCTACACA CCGGAGCTGT ATCCCACGCC GCTCAGGGGG ACTGGAAACG GAGCAGCGGG AGTATGGGCA AGGATAGCGG GTATAATAGC TCCTTACTAC ACAGGCTTCA TGATGGAGAA AGGAAAAAGC ATCGCGGAAA CCCTCGCATG GATCTCCGCG ATGGCAATGT TTGCCGGTGT GATCGTTCTG ATGTTTGGAA GAGAAACAAA GGGGAAATAC GTGGATTAA
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Protein sequence | MRIDEIVEKY VDRKTQRRFL ILTSIAWMFD AAGVMLLSFV LPYVIKEWNL TSTQGATIAS ATFLGMLFGA LSVGFVADLL GRKVSNLFFF IVTITFTFLS GFSSSFETLL VLRGLSGFGY GGLMPSFNAY LAEFTSIRLR GRYLVLLESS WAVGSILIGL FAVNVLPNWR WVFWIFSIGY LFVPVFLRMP ETPKYAFLKG GKEALERSLG KRVEEEVELP KKEKVPILAL LKREHLKDTV VIWIAWFVVS FVYYALFTWA PRIFSSLGVS VVKSSWFTFY MMVAQLPGYL SAAYFIEKWG RKASLGVYFI GTGLVALLWA NVRGDASLLA AALVLSFFCL GVWGLVYAYT PELYPTPLRG TGNGAAGVWA RIAGIIAPYY TGFMMEKGKS IAETLAWISA MAMFAGVIVL MFGRETKGKY VD
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