Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1187 |
Symbol | tsf |
ID | 5171521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1208865 |
End bp | 1209464 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640563706 |
Product | elongation factor Ts |
Protein accession | YP_001244777 |
Protein GI | 148270317 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000118419 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAT CCATGGACCT AATCAAAAAG CTCAGAGAGA TGACGGGAGC AGGTATTCTG GATTGTAAAA AAGCCCTCGA AGAAGCCGGC GGTGATATGG AAAAAGCGGT GGAGATTCTC AGAAAAAAGG GTGCTGCAAC AGCAGAAAAG AAAGCCGGAA GAACTACCAA AGAAGGAATC ATCGTTGCTT ACGTTCATTT CAACGGAAGA ATAGGTGTTC TGCTCGAAAT GAATTGCGAA ACAGATTTCG TGGCGCGAAC CGATGAGTTC AAAGAACTCG CCTACAATCT CGCAAAACAG GTTGCCGCGA TGAAGCCTCT GTACGTCAGG AGAGAGGACG TTCCCGCAGA AGTCATAGAG AAAGAGAAAG AAATCTACAG GGCCCAGATC AAGGATAAAC CTGAAAACAT CGTTGAAAAG ATCGTGGAAG GAAAGCTTGA AAAATACTTC GAACAGGTGT GTCTCTACGA ACAGACCTAC ATATTCGACG ATACAAAAAA GGTAAAAGAT CTCATAAACG AACTCATAGC GAAAACAGGA GAAAACATAA GGGTTTCAAG GTTTACAAGA TACGAGATAG GAGAGGGCTA TGAAGATTGA
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Protein sequence | MEISMDLIKK LREMTGAGIL DCKKALEEAG GDMEKAVEIL RKKGAATAEK KAGRTTKEGI IVAYVHFNGR IGVLLEMNCE TDFVARTDEF KELAYNLAKQ VAAMKPLYVR REDVPAEVIE KEKEIYRAQI KDKPENIVEK IVEGKLEKYF EQVCLYEQTY IFDDTKKVKD LINELIAKTG ENIRVSRFTR YEIGEGYED
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