Gene Tpet_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1175 
Symbol 
ID5171544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1199796 
End bp1200638 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content47% 
IMG OID640563694 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001244765 
Protein GI148270305 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.108763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGATCA CGTTTTCAAA AAAAGAGAAA ATATTTCTCG CTGTCTTCAT TTCCCTCTAC 
GTTCTCGTCG CCGTCTTGAA CATCCAGCAG CTGAAACGGA CACCCATGGA AGAGATCTTC
GGTGGTCTCG GTAAAAGGTG GATTGTGGAT ATAAACGGCT TCAGGATCAA TCCCATGACC
ATCATCGTTG GAACGGCTAT AGCGATCTTT CTAATAGTGC TCGCGTACAG ACTGAGAAAG
TTCGAAATGA TTCCAAACAG AAAGCAGGCT TTCATGGAGT CGATCCTCGA GATGTTTTAC
GAGATCGTTG ACGAATCGAT CCCAGATAAG CGATTCGTGA AACCCACTTT TGTAGTCGCA
ACCACACTTT TCCTCTTCAT CACCATCTCG AACATAATAG GTGGAGCGGT GCCGGGCGTG
AGTGTGGTCG CCGATGAAAC TGGAGCTGTT CAGAAAGTAG TACTCTTCAA CGACACCTGG
CCGGCACCAA CAGGAGACCT AAACACCAAT CTCACCTACG CCGTCATGGT CCTCATCATC
AGCCATGCTT TCGCCATAAA GTCCAAGGGA TTCAAAGAGT GGCTGAAGTC CTGGTTCTAT
CCAAATCCGG TTATGTTCCC TATAAACCTC ATCGGCGAAC TGGCAAAACC CATCTCCCAT
TCTCTGAGGT TGTTTGGTAA TATAGGAGGT GGAGCAATAC TCGTTTACAT CCTCTCTTAC
ATGACGAAGT ACTTCTTCGC TCCCATCATT TTCTGGGGAT TCTTCGGTAT CTTCGTTGGT
CTGGTACAGG CGTTCGTGTT CAGTATGCTC GCAGTTGCAT ACATCAGTTC ACAACTTTCG
TAA
 
Protein sequence
MKITFSKKEK IFLAVFISLY VLVAVLNIQQ LKRTPMEEIF GGLGKRWIVD INGFRINPMT 
IIVGTAIAIF LIVLAYRLRK FEMIPNRKQA FMESILEMFY EIVDESIPDK RFVKPTFVVA
TTLFLFITIS NIIGGAVPGV SVVADETGAV QKVVLFNDTW PAPTGDLNTN LTYAVMVLII
SHAFAIKSKG FKEWLKSWFY PNPVMFPINL IGELAKPISH SLRLFGNIGG GAILVYILSY
MTKYFFAPII FWGFFGIFVG LVQAFVFSML AVAYISSQLS