| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1172 |
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| Symbol | |
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| ID | 5170295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1196064 |
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| End bp | 1198745 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563691 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001244762 |
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| Protein GI | 148270302 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAGGC TATTTCTCTT TGATGGAACC GCTCTGGCTT ACAGAGCGTA TTATGCGCTC
GATAGATCGC TTTCCACCTC CGCCGGCATT CCCACAAACG CCACGTACGG TGTGGCGAGG
ATGCTGGTGA GATTCATCAA AGACCATATC ATCGTCGGGA AAGACTACGC TGCTGTGGCT
TTCGACAAAA GAGCTGCTAC CTTCAGGCAC AAGCTCCTCG AGACTTACAA GGCTCAAAGA
CCAAAGACTC CGGATCTCCT GATCCAGCAA CTTCCGTACA TAAAAAGACT TGTTGAAGCG
CTTGGAATGA AGGTGCTGGA GATAGAGGGA TACGAAGCAG ACGATATAAT TGCCACTCTG
GCTGTGAAGG GGCTTTCGCT TTTCGACGAG ATATTCATAG TGACTGGTGA CAAAGATATG
CTTCAGCTTG TGAACGAAAA GATCAAGGTG TGGCGAATCG TAAAAGGGAT CTCCGACCTG
GAACTTTACG ATGCACAGAA GGTGAAGGAA AAATACGGTG TTGAACCCCA TCAGATTCCC
GATCTTCTGG CTCTAACCGG AGACGAAATA GACAACATCC CCGGTGTGAC CGGGATAGGT
GAAAAAACGG CCGTTCAGCT CCTCGAGAAA TACAGAGACC TCGAAGACAT CCTGAATCAT
ATTCACGAAC TTCCTCAAAA GACGAGAAAA ACCATGCTTC GGGACAGAGA AAGTGCCATT
CTCAGCAAAA AGCTGGCGAT TCTGGAAACA AACGTTCCCA TCGAAATAAA CTGGGAAGAA
CTTCGCTACC AGGGCCACGA CAGAGAGAAA CTCCTGTCAC TCTTGAAAGA ACTGGAATTC
GCATCCATCA TGAAGGAACT CCAACTGTAC GAAGAGTCCG AACCTGTTGG ATACAGAATA
GTGAAAGATC CGGTGGAATT TGAAAAACTC GTAGAGAAGC TGAAAGAAAC CCCTTCGTTT
GCCATAGATC TTGAAACGTC TTCCCTCGAT CCCTTCGAAT GCGACATTGC TGGTATTTCC
TTGTCATTCA AACCGAAGGA AGCGTACTAC ATACCACTCC ATCACAGAAA CGCCCAGAAC
CTGGATGAAA AAGAGGTCTT GAAAAAGCTA AAAGAAATCC TGGAGGATCC TGGAGCAAAG
ATCGTTGGTC AGAATCTGAA ATTCGACTAC AAGGTTTTGA TGGTAAAGGG TATAGAACCT
GTCCCTCCTC ACTTCGACAC GATGATAGCG GCTTACCTTA TTGAACCGAA CGAAAAAAAA
TTCAATCTGG ACGATCTCGC ACTTAAATTT CTCGGTTACA AAATGACTTC CTACCAGGAA
CTCATGTCTT TCTCCTCACC GCTGTTTGGT TTCAGTTTTG TCGATGTTCC TCTGGAAAAA
GCAGCGAACT ATTCCTGTGA AGATGCAGAC ATCACCTACA GGCTCTACAA GACCCTGAGC
TTAAAACTCC ACGAGGCAGA TCTGGAGAAC GTGTTCTACA AGATAGAAAT GCCTCTTGTA
AGCGTGCTTG CACGGATGGA ACTGAACGGT GTGTACGTGG ACACAGAGTT CCTGAAGAAA
CTCTCAGAAG AGTACGGAAA AAAACTCGAA GAACTGGCAG AGGAAATATA CAGGATAGCT
GGAGAACCGT TCAACATAAA CTCACCGAAA CAGGTTTCAA GGATCCTCTT TGAAAAACTC
GGCATAAAAC CACGTGGTAA AACGACGAAA ACGGGAGACT ACTCAACACG CATAGAAGTC
CTCGAGGAAC TTGCCGGTGA ACACGAAATC ATTCCTCTGA TTCTCGAATA CAGAAAGATA
CAGAAATTGA AATCAACCTA CATAGACGCC CTCCCCAAGA TGGTCAACCC AAAGACCGGA
AGAATTCATG CTTCTTTCAA TCAAACGGGG ACTGCCACTG GAAGACTCAG CAGCAGCGAT
CCCAACCTTC AGAACCTCCC GACGAAAAGC GAAGAGGGAA AAGAAATCAG GAAAGCGATA
GTTCCTCAGG ATCCAAACTG GTGGATCGTC AGCGCCGACT ACTCCCAGAT AGAACTGAGG
ATTCTTGCCC ATCTCAGTGG TGATGAGAAT CTTTTGAGGG CATTCGAAGA GGGCATCGAC
GTCCACACTC TAACAGCTTC CAGAATATTC AACGTGAAAC CCGAAGAGGT AACTGAAGAG
ATGCGCCGCG CCGGTAAAAT GGTGAATTTT TCCATCATAT ACGGAGTAAC ACCTTATGGT
CTGTCTGTGA GGCTTGGGGT ACCTGTGAAA GAAGCAGAAA AGATGATCGT CAACTACTTC
GTCCTCTACC CAAAGGTGCG CGATTACATT CAGAGGGTCG TATCGGAAGC GAAAGAAAAA
GGCTATGTTA GAACGCTGTT TGGAAGAAAA AGAGACATAC CACAGCTCAT GGCCCGGGAC
AGGAACACAC AGGCTGAAGG AGAACGAATT GCCATAAACA CTCCCATACA GGGTACAGCA
GCGGATATAA TAAAGCTGGC TATGATAGAA ATAGACAGGG AACTGAAAGA AAGAAAAATG
AGATCGAAGA TGATCATACA GGTCCACGAC GAACTGGTTT TTGAAGTGCC CAATGAGGAA
AAGGACGCGC TCGTCGAGCT GGTGAAAGAC AGAATGACGA ATGTGGTAAA GCTTTCAGTG
CCGCTCGAAG TGGATGTAAC CATCGGCAAA ACATGGTCGT GA
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| Protein sequence | MARLFLFDGT ALAYRAYYAL DRSLSTSAGI PTNATYGVAR MLVRFIKDHI IVGKDYAAVA
FDKRAATFRH KLLETYKAQR PKTPDLLIQQ LPYIKRLVEA LGMKVLEIEG YEADDIIATL
AVKGLSLFDE IFIVTGDKDM LQLVNEKIKV WRIVKGISDL ELYDAQKVKE KYGVEPHQIP
DLLALTGDEI DNIPGVTGIG EKTAVQLLEK YRDLEDILNH IHELPQKTRK TMLRDRESAI
LSKKLAILET NVPIEINWEE LRYQGHDREK LLSLLKELEF ASIMKELQLY EESEPVGYRI
VKDPVEFEKL VEKLKETPSF AIDLETSSLD PFECDIAGIS LSFKPKEAYY IPLHHRNAQN
LDEKEVLKKL KEILEDPGAK IVGQNLKFDY KVLMVKGIEP VPPHFDTMIA AYLIEPNEKK
FNLDDLALKF LGYKMTSYQE LMSFSSPLFG FSFVDVPLEK AANYSCEDAD ITYRLYKTLS
LKLHEADLEN VFYKIEMPLV SVLARMELNG VYVDTEFLKK LSEEYGKKLE ELAEEIYRIA
GEPFNINSPK QVSRILFEKL GIKPRGKTTK TGDYSTRIEV LEELAGEHEI IPLILEYRKI
QKLKSTYIDA LPKMVNPKTG RIHASFNQTG TATGRLSSSD PNLQNLPTKS EEGKEIRKAI
VPQDPNWWIV SADYSQIELR ILAHLSGDEN LLRAFEEGID VHTLTASRIF NVKPEEVTEE
MRRAGKMVNF SIIYGVTPYG LSVRLGVPVK EAEKMIVNYF VLYPKVRDYI QRVVSEAKEK
GYVRTLFGRK RDIPQLMARD RNTQAEGERI AINTPIQGTA ADIIKLAMIE IDRELKERKM
RSKMIIQVHD ELVFEVPNEE KDALVELVKD RMTNVVKLSV PLEVDVTIGK TWS
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