Gene Tpet_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1170 
Symbol 
ID5170790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp1195046 
End bp1195714 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content44% 
IMG OID640563689 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_001244760 
Protein GI148270300 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGTTC TGGGTCACAG AGGATACTCC GCAAAATACC TTGAAAACAC TCTCGAAGCA 
CTTATGAAGG CGATAGAAGC GGGAGCAGAT GGGGTGGAAC TGGACGTGAG ACTGTCGAAA 
GATGGGGAAG TTGTCGTCTC ACACGATGAA GATTTGAAAA GACTGTTCGG TCTGGACGTG 
AAGATAAGAG ATGCCACCGT GTCAGAACTG AAAGAATTAA CAGATGGGAA AATGACCACC 
CTTAGGGAAG TGTTCGAAAA CATCACGGAT GATAAAATCA TTAACGTTGA GATAAAAGAA 
AGAGAAGTGG CAGATGCCGT TCTGGAAATT TCGAAAAGAA GGAAGAATCT GATATTCTCC 
TCTTTCGATC TGGACCTTCT CGATGAGAAA TTCAAGGGGA CAAAATACGG CTATCTGATA 
GATGAAGAAA ACTACGGAAG TATCGAAAAC TTTGTCGAGA GAGTTGAAAA AGAACTTCCT 
TATTCACTCC ACATTCCATA CCAGGCGTTT GAGTTAGAAT ACGCGGTGGA GGTTTTGAGG 
AGTTTCAGAA AAAAAGGAAT CTTGGTCCTC GTCTGGACGC TGAACGATTC GGAGATCTAT 
CGAAAGATAC GCGGAGAAAT AGATGGGGTT ATCACAGACG AAGTGGAACT CTTCGTGAAG 
TTGAGGTGA
 
Protein sequence
MIVLGHRGYS AKYLENTLEA LMKAIEAGAD GVELDVRLSK DGEVVVSHDE DLKRLFGLDV 
KIRDATVSEL KELTDGKMTT LREVFENITD DKIINVEIKE REVADAVLEI SKRRKNLIFS 
SFDLDLLDEK FKGTKYGYLI DEENYGSIEN FVERVEKELP YSLHIPYQAF ELEYAVEVLR 
SFRKKGILVL VWTLNDSEIY RKIRGEIDGV ITDEVELFVK LR