| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1168 |
|---|
| Symbol | |
|---|
| ID | 5170993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1192771 |
|---|
| End bp | 1194588 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640563687 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_001244758 |
|---|
| Protein GI | 148270298 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTACAGAC CCGACCTGAT CAGAAACATA TGTATAATAG CGCATATCGA CCATGGAAAG
ACTACTCTGG TGGACAGGAT TCTTGAAATC ACAAACACGG TGGACAAAAG AAAAATGAGA
GAGCAGTACC TGGATATGAT GGATATAGAA AGAGAAAGAG GAATCACCAT AAAAGCCCAG
CCGGTGAAGG TCATGTACAC GGCAGAAGAT GGAAACACCT ACGAGATAAA CATCATAGAT
ACACCGGGAC ATGTGGATTT TTCTTACGAA GTGGGAAGAA GCATGGCGGC CTGTGAAGGT
GCCATCTTGC TTGTCGATGC GACACAGGGA GTGGAAGCTC AGACAGTTGC CCACACCTAT
CTTGCCATAG AGCATGATCT GGAGATAATT CCGGTGATCA ACAAGATAGA TCTTCCGAAT
GCAAACATTG AAGAAACCGC TCTCGAAATA AAGGACCTTC TCGGCGCGAG TGAAGATGAG
ATCCTGCTCG TCAGTGCCAA GGAAGGAACG GGTGTGAAAG AACTCCTCGA AGCCATCGTC
AAAAGGGTTC CTCCTCCGAA GGGAGATATC AACGGTAAAC TCAAGGCGCT CATATTCGAC
GCAAAATACG ACAACTACAA AGGCGTGATC GTGCATGTTC GTCTCTTCGA TGGACAGGTA
AAACCCGGTG ATAAAATAAT GACCTTCTCC AACAGGAAGG TTTACGAAGT CCAGGAAGTA
GGAGTGTTTT TGCCAGAGAT GAAACCAGTG GATTCACTCA GCGCAGGTGA AGTGGGATAC
ATCATCGCAG GAATAAAAGA GGTGTCGGAC GCGCGAGTGG GGGACACGAT CACATCGGCG
AATGATCCAG TTGATGAAGC TCTTCCAGGA TACAGAGAGA TAAAACCGAT GGTTTTCGCC
GGGATGTTTC CAGGACTTCC CGAATACTAC GAAGAACTCA GAAAGGCACT CGAAAAGTTG
AAACTCAACG ATTCTGCACT GTATTTCGAG CCCACGATAT CTCCGGCTAT GGGCTTTGGC
TTTCGATGTG GTTTTCTGGG GCCACTTCAT ATGGAAGTGG TGCGAGAAAG AATAGAGAGA
GAATTCGACC TTGCCGTCAT TCTCACCGCA CCGAACGTCA GATACAAGGT GAAACTCAGA
AACGGCGAGG AAATAGAGAT CACAGATCCT TCCAAATTTC CCGATGAAGG AGAGATACTG
GAAGCGTACG AACCGTACGT TGATCTTTCG ATCATCACAC CGAGTGAATA CATTGGAGCG
ATAATAAATC TCGTTCAAAA TGAGAAGAGA GGAGAACTCA GAATAACCGA GAACGCTGGA
AAAAACCGGG TCATTCTAAA ATTCGACGCT CCACTTGCCG AGATAATATA CGATTTCTTC
GATAAGATGA AAGCGGTGAG CAGAGGCTAC GCTTCCATGG ATTACGAGTT CAAAGAGTAC
AGAAAAAGCG ACCTGGTGAA GGTTACCATA CTCGTAAACA AAGAACCCGT CGATGCATTG
TCGTTCATAG CACATCGCTC GAAAGCGTAC CAGATAGCCC GAAAGATGGT GGATAAACTG
AAAGATCTGA TTCCACGCCA CCAGTTCCAA ATTCCTATTC AGGCTAAGGC TGACGGCAGA
ATAATAGCAA GAGCGGACAT AAAAGCGCTC AGAAAAGACG TTCTGGCGAA ATGTTACGGT
GGAGATGTGA CGAGGAAAAT GAAACTTCTC GAAAAACAAA AAGAGGGTAA AAAGAAACTC
AGGGAAATCG GACAGGTCAC CATACCGCAG GAAGCGTTTC TTGCTCTTCT CAAAATAGGA
GAGGAGGAAG AAAAGTGA
|
|---|
| Protein sequence | MYRPDLIRNI CIIAHIDHGK TTLVDRILEI TNTVDKRKMR EQYLDMMDIE RERGITIKAQ
PVKVMYTAED GNTYEINIID TPGHVDFSYE VGRSMAACEG AILLVDATQG VEAQTVAHTY
LAIEHDLEII PVINKIDLPN ANIEETALEI KDLLGASEDE ILLVSAKEGT GVKELLEAIV
KRVPPPKGDI NGKLKALIFD AKYDNYKGVI VHVRLFDGQV KPGDKIMTFS NRKVYEVQEV
GVFLPEMKPV DSLSAGEVGY IIAGIKEVSD ARVGDTITSA NDPVDEALPG YREIKPMVFA
GMFPGLPEYY EELRKALEKL KLNDSALYFE PTISPAMGFG FRCGFLGPLH MEVVRERIER
EFDLAVILTA PNVRYKVKLR NGEEIEITDP SKFPDEGEIL EAYEPYVDLS IITPSEYIGA
IINLVQNEKR GELRITENAG KNRVILKFDA PLAEIIYDFF DKMKAVSRGY ASMDYEFKEY
RKSDLVKVTI LVNKEPVDAL SFIAHRSKAY QIARKMVDKL KDLIPRHQFQ IPIQAKADGR
IIARADIKAL RKDVLAKCYG GDVTRKMKLL EKQKEGKKKL REIGQVTIPQ EAFLALLKIG
EEEEK
|
|---|
| |