| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1158 |
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| Symbol | |
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| ID | 5171746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1182409 |
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| End bp | 1184679 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563677 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001244748 |
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| Protein GI | 148270288 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00154728 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGTGTA TTCCTTTGAG AAACGGGATG GGAGTTTTTC CAAACACCGT TGTTCCTTTC
TACGTGGGAA GGACCGGCTC TCTTATAGCA CTCGAAGAAG CCATGGAAAA GTACAACAGA
CTTCTTCTGG TGGTCAATCA GAAAGATCCA TCCGTTGAGA CACCAGAACC GGAAGACCTC
TACAAAGTGG GAACGGTTGT GAAGGTGCTT CAGATAATGA AGCTTCCAGA TGACACGTTC
AAGGTGCTCG TGGAAGGGCT GGAGAGAGCT CAAATCGAGG AATTCGTCTC GACTGATCCT
TTCTTCCTCA CGAAGATAAA AATACTGAAG GTGAAATACA GAAAAACGAA GAAACTCGAA
GCACTTATGA GAAGCGTCAA AGACAAGGCA GTCAGATATT TCAACCTGAC CCACAGGTTT
CCTCAGGAGA CGCTCGTTAC CCTTAAAGAA ATGCAGGATC CGGACAAGCT CGCAGACTTC
GTTGCTTCGA TTCTTCCCGT TCCTCTGGAG ACGAAGCAGG AACTCCTCGA GACGATTCAT
CCTCTTGAAC GTCTCGAGAA GATACTCTCA ATACTGGTGA AAGAAATCGA GATTCTCGAG
ATAGAAGAAG AAATTGAGAA AAAGGTGAAG GACAGAATAG AGAAGACCCA GAGAGAATAC
GTGCTCCGCG AAAAGCTCAG GGCTATAAAA GAAGAACTCG GAGCGGAAGA GGAGTTAGAG
ATCAAGGAGC TCTACGAGAA GGTAGAAAAA GGTGATTACC CAGACTACGT GAAGGAAAAG
GCTTACAAAG AGATTCAAAG GCTCGAGAAG ATGTCGCCCT ACAGTGCCGA GGCGACGGTT
GTCAGGACCT ATCTTGACTG GCTTCTGAAC CTTCCATGGA GCGCTGCCAG CGAGGATAGA
CTCGACATAA AGGAAGCGGG GAAGATCCTG GATAAGAACC ATTACGGGCT CGAAGAGGTC
AAGGAGAGAA TACTGGAGTA TCTCGTGGCC AGGAAGTTTT CAAAGAATCT CAAAGCTCCC
ATTCTCTGCC TTGTGGGACC TCCGGGAGTG GGGAAAACGT CGCTGGGCAG AACCATCGCA
GAAGCGATGG GAAGAAAGTT CGGAAGAATG TCCCTTGGAG GCCTCAGAGA CGAGGCAGAA
ATAAAGGGAC ACAGGCGTAC TTATGTGGGG GCGCTTCCGG GAAGAATCAT ACAGATCATA
AGAAGGCTGG GAACGAAGAA TCCCGTTATT CTGCTCGACG AAGTGGACAA GATGGGAATC
AGTTTTCAGG GTGATCCGGC GTCTGCTCTG CTCGAAGTTC TCGATCCCGA ACAGAACAAG
GACTTCGTCG ATCACTATCT CGAAGTACCC TTCGATCTCT CTCAGGTGCT GTTCATTACA
ACCGCGAACG TGCTTCACAC CATTCCTCCC GCGCTGAGGG ACAGAATGGA GATCATAGAG
ATACCAGGGT ACTCGGATCC AGAGAAGTAC CACATAGCCA GGGACTACAT AATACCGAAG
ATTGCACAGG CTTATGGCCT GTCAAAGGTG ATGTTTACTC CTGGAGCGAT CAAAAAGATC
ATCAGGGAGT ACACAAAAGA AGCGGGTGTG AGAAATCTCG AGAGAGTCAT AGAAAAGGTG
ATAAGAAAAA GTCTTGTGAA GGGCGAGAAG AAGTCTTTCA AAATAACCAC TAAGGATATC
GAAGAGCTTC TCGGACCTCC TGTTTTCAAG GAGGAGGAGA TTTTGGAAGA AGACACAGTG
GGAGCAGTTA CAGGCCTTGC CTGGACTCCA GTTGGTGGAA GTGTTCTCAT CGTGGAGAGT
CTGCTGGTCC CCGGAAAAGG CAATCTCATT TTAACAGGAA ACATGGGTGA CGTGATGAAA
GAATCTGCCA GAATAGCCCT CAGTGTGGTC AGGAAGATGT GTGGAGAAGA ATGCAGAGAG
GTCTTCGAGA AGAACGACAT CCACATCCAC GTTCCAGAAG GAGCCGTTCC AAAGGATGGC
CCCTCCGCCG GCATAACGAT CACGGTGGCC CTGTACTCTG CCGTCACCGG TAAAAAAGTC
AGAAGGGATG TAGCCATGAC GGGTGAGATC ACGTTGAGGG GTAAAATACT CCCGGTGGGA
GGGATAAGAG AGAAATTGCT CGCGGCAAAG AGAGCCGGCA TAAAAAAAGT AATCCTTCCT
TCGAGAAACA GACCAGACGT GGAAAAGATA CCGAAGGAAT ATCTGAACGG GATGGAGATC
GTTTACTGTA GTGAAATACA GGAAGTTCTC AAGGAGGCCA TTGTGAGGTG A
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| Protein sequence | MPCIPLRNGM GVFPNTVVPF YVGRTGSLIA LEEAMEKYNR LLLVVNQKDP SVETPEPEDL
YKVGTVVKVL QIMKLPDDTF KVLVEGLERA QIEEFVSTDP FFLTKIKILK VKYRKTKKLE
ALMRSVKDKA VRYFNLTHRF PQETLVTLKE MQDPDKLADF VASILPVPLE TKQELLETIH
PLERLEKILS ILVKEIEILE IEEEIEKKVK DRIEKTQREY VLREKLRAIK EELGAEEELE
IKELYEKVEK GDYPDYVKEK AYKEIQRLEK MSPYSAEATV VRTYLDWLLN LPWSAASEDR
LDIKEAGKIL DKNHYGLEEV KERILEYLVA RKFSKNLKAP ILCLVGPPGV GKTSLGRTIA
EAMGRKFGRM SLGGLRDEAE IKGHRRTYVG ALPGRIIQII RRLGTKNPVI LLDEVDKMGI
SFQGDPASAL LEVLDPEQNK DFVDHYLEVP FDLSQVLFIT TANVLHTIPP ALRDRMEIIE
IPGYSDPEKY HIARDYIIPK IAQAYGLSKV MFTPGAIKKI IREYTKEAGV RNLERVIEKV
IRKSLVKGEK KSFKITTKDI EELLGPPVFK EEEILEEDTV GAVTGLAWTP VGGSVLIVES
LLVPGKGNLI LTGNMGDVMK ESARIALSVV RKMCGEECRE VFEKNDIHIH VPEGAVPKDG
PSAGITITVA LYSAVTGKKV RRDVAMTGEI TLRGKILPVG GIREKLLAAK RAGIKKVILP
SRNRPDVEKI PKEYLNGMEI VYCSEIQEVL KEAIVR
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